Literature DB >> 11825904

The role of the cross-link His-Tyr in the functional properties of the binuclear center in cytochrome c oxidase.

Eftychia Pinakoulaki1, Ute Pfitzner, Bernd Ludwig, Constantinos Varotsis.   

Abstract

Resonance Raman and Fourier transform infrared spectroscopies have been used to study the aa(3)-type cytochrome c oxidase and the Y280H mutant from Paracoccus denitrificans. The stability of the binuclear center in the absence of the Tyr(280)-His(276) cross-link is not compromised since heme a(3) retains the same proximal environment, spin, and coordination state as in the wild type enzyme in both the oxidized and reduced states. We observe two C-O modes in the Y280H mutant at 1966 and 1975 cm(-1). The 1975 cm(-1) mode is assigned to a gamma-form and represents a structure of the active site in which Cu(B) exerts a steric effect on the heme a(3)-bound CO. Therefore, the role of the cross-link is to fix Cu(B) in a certain configuration and distance from heme a(3), and not to allow histidine ligands to coordinate to Cu(B) rather than to heme a(3), rendering the enzyme inactive, as proposed recently (Das, T. K., Pecoraro, C., Tomson, F. L., Gennis, R. B., and Rousseau, D. L. (1998) Biochemistry 37, 14471-14476). The results provide solid evidence that in the Y280H mutant the catalytic site retains its active configuration that allows O(2) binding to heme a(3). Oxygenated intermediates are formed by mixing oxygen with the CO-bound mixed-valence wild type and Y280H enzymes with similar Soret maxima at 438 nm.

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Year:  2002        PMID: 11825904     DOI: 10.1074/jbc.M112200200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  16 in total

1.  Probing protonation/deprotonation of tyrosine residues in cytochrome ba3 oxidase from Thermus thermophilus by time-resolved step-scan Fourier transform infrared spectroscopy.

Authors:  Constantinos Koutsoupakis; Olga Kolaj-Robin; Tewfik Soulimane; Constantinos Varotsis
Journal:  J Biol Chem       Date:  2011-07-12       Impact factor: 5.157

2.  Phase-sensitive detection in modulation excitation spectroscopy applied to potential induced electron transfer in cytochrome c oxidase.

Authors:  Andreas Schwaighofer; Shelagh Ferguson-Miller; Renate L C Naumann; Wolfgang Knoll; Christoph Nowak
Journal:  Appl Spectrosc       Date:  2014       Impact factor: 2.388

3.  Formation and Reactivity of New Isoporphyrins: Implications for Understanding the Tyr-His Cross-Link Cofactor Biogenesis in Cytochrome c Oxidase.

Authors:  Melanie A Ehudin; Laura Senft; Alicja Franke; Ivana Ivanović-Burmazović; Kenneth D Karlin
Journal:  J Am Chem Soc       Date:  2019-06-26       Impact factor: 15.419

4.  Identification of a histidine-tyrosine cross-link in the active site of the cbb3-type cytochrome c oxidase from Rhodobacter sphaeroides.

Authors:  Virve Rauhamäki; Marc Baumann; Rabah Soliymani; Anne Puustinen; Mårten Wikström
Journal:  Proc Natl Acad Sci U S A       Date:  2006-10-23       Impact factor: 11.205

5.  Time-resolved surface-enhanced IR-absorption spectroscopy of direct electron transfer to cytochrome c oxidase from R. sphaeroides.

Authors:  Andreas Schwaighofer; Christoph Steininger; David M Hildenbrandt; Johannes Srajer; Christoph Nowak; Wolfgang Knoll; Renate L C Naumann
Journal:  Biophys J       Date:  2013-12-17       Impact factor: 4.033

6.  Interactions of Cu(B) with Carbon Monoxide in Cytochrome c Oxidase: Origin of the Anomalous Correlation between the Fe-CO and C-O Stretching Frequencies.

Authors:  Tsuyoshi Egawa; Jonah Haber; James A Fee; Syun-Ru Yeh; Denis L Rousseau
Journal:  J Phys Chem B       Date:  2015-06-25       Impact factor: 2.991

7.  Mutagenesis of tyrosine residues within helix VII in subunit I of the cytochrome cbb₃ oxidase from Rhodobacter capsulatus.

Authors:  Mehmet Oztürk; Nicholas J Watmough
Journal:  Mol Biol Rep       Date:  2010-11-24       Impact factor: 2.316

8.  A spectroscopic investigation of a tridentate Cu-complex mimicking the tyrosine-histidine cross-link of cytochrome C oxidase.

Authors:  Adam Offenbacher; Kimberly N White; Indranil Sen; Allen G Oliver; Joseph P Konopelski; Bridgette A Barry; Olöf Einarsdóttir
Journal:  J Phys Chem B       Date:  2009-05-21       Impact factor: 2.991

9.  The protein effect in the structure of two ferryl-oxo intermediates at the same oxidation level in the heme copper binuclear center of cytochrome c oxidase.

Authors:  Eftychia Pinakoulaki; Vangelis Daskalakis; Takehiro Ohta; Oliver-Matthias H Richter; Kerstin Budiman; Teizo Kitagawa; Bernd Ludwig; Constantinos Varotsis
Journal:  J Biol Chem       Date:  2013-05-30       Impact factor: 5.157

Review 10.  Binding and docking interactions of NO, CO and O₂in heme proteins as probed by density functional theory.

Authors:  Vangelis Daskalakis; Constantinos Varotsis
Journal:  Int J Mol Sci       Date:  2009-09-22       Impact factor: 6.208

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