Literature DB >> 11823439

A cyclophilin functions in pre-mRNA splicing.

David S Horowitz1, Edward J Lee, Stephen A Mabon, Tom Misteli.   

Abstract

We report that the cyclophilin USA-CyP is part of distinct complexes with two spliceosomal proteins and is involved in both steps of pre-mRNA splicing. The splicing factors hPrp18 and hPrp4 have a short region of homology that defines a high affinity binding site for USA-CyP in each protein. USA-CyP forms separate, stable complexes with hPrp18 and hPrp4 in which the active site of the cyclophilin is exposed. The cyclophilin inhibitor cyclosporin A slows pre-mRNA splicing in vitro, and we show that its inhibition of the second step of splicing is caused by blocking the action of USA-CyP within its complex with hPrp18. Cyclosporin A also slows splicing in vivo, and we show that this slowing results specifically from inhibition of USA-CyP. Our results lead to a model in which USA-CyP is carried into the spliceosome in complexes with hPrp4 and hPrp18, and USA-CyP acts during splicing within these complexes. These results provide an example of the function of a cyclophilin in a complex process and provide insight into the mechanisms of action of cyclophilins.

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Year:  2002        PMID: 11823439      PMCID: PMC125845          DOI: 10.1093/emboj/21.3.470

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  34 in total

1.  RNA polymerase II targets pre-mRNA splicing factors to transcription sites in vivo.

Authors:  T Misteli; D L Spector
Journal:  Mol Cell       Date:  1999-06       Impact factor: 17.970

2.  Crystal structure of the human U4/U6 small nuclear ribonucleoprotein particle-specific SnuCyp-20, a nuclear cyclophilin.

Authors:  U Reidt; K Reuter; T Achsel; D Ingelfinger; R Lührmann; R Ficner
Journal:  J Biol Chem       Date:  2000-03-17       Impact factor: 5.157

Review 3.  Immunophilins: switched on protein binding domains?

Authors:  M T Ivery
Journal:  Med Res Rev       Date:  2000-11       Impact factor: 12.944

4.  The vaccinia virus mRNA (guanine-N7-)-methyltransferase requires both subunits of the mRNA capping enzyme for activity.

Authors:  M A Higman; N Bourgeois; E G Niles
Journal:  J Biol Chem       Date:  1992-08-15       Impact factor: 5.157

5.  Crystal structure of the functional domain of the splicing factor Prp18.

Authors:  J Jiang; D S Horowitz; R M Xu
Journal:  Proc Natl Acad Sci U S A       Date:  2000-03-28       Impact factor: 11.205

6.  Host cyclophilin A mediates HIV-1 attachment to target cells via heparans.

Authors:  A C Saphire; M D Bobardt; P A Gallay
Journal:  EMBO J       Date:  1999-12-01       Impact factor: 11.598

7.  Stages in the second reaction of pre-mRNA splicing: the final step is ATP independent.

Authors:  D S Horowitz; J Abelson
Journal:  Genes Dev       Date:  1993-02       Impact factor: 11.361

8.  Cyclophilin A regulates HIV-1 infectivity, as demonstrated by gene targeting in human T cells.

Authors:  D Braaten; J Luban
Journal:  EMBO J       Date:  2001-03-15       Impact factor: 11.598

9.  Human and Escherichia coli cyclophilins: sensitivity to inhibition by the immunosuppressant cyclosporin A correlates with a specific tryptophan residue.

Authors:  J Liu; C M Chen; C T Walsh
Journal:  Biochemistry       Date:  1991-03-05       Impact factor: 3.162

Review 10.  The mechanism of action of cyclosporin A and FK506.

Authors:  S L Schreiber; G R Crabtree
Journal:  Immunol Today       Date:  1992-04
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  49 in total

1.  Large-scale proteomic analysis of the human spliceosome.

Authors:  Juri Rappsilber; Ursula Ryder; Angus I Lamond; Matthias Mann
Journal:  Genome Res       Date:  2002-08       Impact factor: 9.043

2.  The Arabidopsis cyclophilin gene family.

Authors:  Patrick G N Romano; Peter Horton; Julie E Gray
Journal:  Plant Physiol       Date:  2004-03-29       Impact factor: 8.340

3.  Cloning, purification, crystallization and preliminary X-ray crystallographic analysis of a cyclophilin A-like protein from Piriformospora indica.

Authors:  Harshesh Bhatt; Dipesh Kumar Trivedi; Ravi Kant Pal; Atul Kumar Johri; Narendra Tuteja; Neel Sarovar Bhavesh
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-05-24

4.  Ectopic expression of ThCYP1, a stress-responsive cyclophilin gene from Thellungiella halophila, confers salt tolerance in fission yeast and tobacco cells.

Authors:  An-Ping Chen; Gui-Ling Wang; Zhan-Liang Qu; Chun-Xia Lu; Ning Liu; Fang Wang; Gui-Xian Xia
Journal:  Plant Cell Rep       Date:  2006-09-14       Impact factor: 4.570

Review 5.  Spliceosomal immunophilins.

Authors:  Annia Mesa; Jason A Somarelli; Rene J Herrera
Journal:  FEBS Lett       Date:  2008-06-09       Impact factor: 4.124

6.  Mutational analysis identifies two separable roles of the Saccharomyces cerevisiae splicing factor Prp18.

Authors:  Dagmar Bacíková; David S Horowitz
Journal:  RNA       Date:  2002-10       Impact factor: 4.942

7.  Structure and Dynamics of GeoCyp: A Thermophilic Cyclophilin with a Novel Substrate Binding Mechanism That Functions Efficiently at Low Temperatures.

Authors:  Michael J Holliday; Carlo Camilloni; Geoffrey S Armstrong; Nancy G Isern; Fengli Zhang; Michele Vendruscolo; Elan Z Eisenmesser
Journal:  Biochemistry       Date:  2015-05-14       Impact factor: 3.162

8.  A large intrinsically disordered region in SKIP and its disorder-order transition induced by PPIL1 binding revealed by NMR.

Authors:  Xingsheng Wang; Shaojie Zhang; Jiahai Zhang; Xiaojuan Huang; Chao Xu; Weiwei Wang; Zhijun Liu; Jihui Wu; Yunyu Shi
Journal:  J Biol Chem       Date:  2009-12-09       Impact factor: 5.157

9.  Heterologous expression of a salinity and developmentally regulated rice cyclophilin gene (OsCyp2) in E. coli and S. cerevisiae confers tolerance towards multiple abiotic stresses.

Authors:  Sumita Kumari; Prabhjeet Singh; Sneh L Singla-Pareek; Ashwani Pareek
Journal:  Mol Biotechnol       Date:  2009-02-12       Impact factor: 2.695

10.  A systems analysis of the chemosensitivity of breast cancer cells to the polyamine analogue PG-11047.

Authors:  Wen-Lin Kuo; Debopriya Das; Safiyyah Ziyad; Sanchita Bhattacharya; William J Gibb; Laura M Heiser; Anguraj Sadanandam; Gerald V Fontenay; Zhi Hu; Nicholas J Wang; Nora Bayani; Heidi S Feiler; Richard M Neve; Andrew J Wyrobek; Paul T Spellman; Laurence J Marton; Joe W Gray
Journal:  BMC Med       Date:  2009-12-14       Impact factor: 8.775

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