Literature DB >> 11823412

The connection between transcription and genomic instability.

Andrés Aguilera1.   

Abstract

Transcription is a central aspect of DNA metabolism that takes place on the same substrate as replication, repair and recombination. Not surprisingly, therefore, there is a physical and functional connection between these processes. In recent years, transcription has proven to be a relevant player in the maintenance of genome integrity and in the induction of genetic instability and diversity. The aim of this review is to provide an integrative view on how transcription can control different aspects of genomic integrity, by exploring different mechanisms that might be responsible for transcription-associated mutation (TAM) and transcription-associated recombination (TAR).

Mesh:

Year:  2002        PMID: 11823412      PMCID: PMC125829          DOI: 10.1093/emboj/21.3.195

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  80 in total

1.  Transcription enhances intrachromosomal homologous recombination in mammalian cells.

Authors:  J A Nickoloff
Journal:  Mol Cell Biol       Date:  1992-12       Impact factor: 4.272

2.  Elevated recombination rates in transcriptionally active DNA.

Authors:  B J Thomas; R Rothstein
Journal:  Cell       Date:  1989-02-24       Impact factor: 41.582

3.  A new role for a yeast transcriptional silencer gene, SIR2, in regulation of recombination in ribosomal DNA.

Authors:  S Gottlieb; R E Esposito
Journal:  Cell       Date:  1989-03-10       Impact factor: 41.582

4.  Induction of RNA-stabilized DNA conformers by transcription of an immunoglobulin switch region.

Authors:  M E Reaban; J A Griffin
Journal:  Nature       Date:  1990-11-22       Impact factor: 49.962

5.  A sensitive genetic assay for the detection of cytosine deamination: determination of rate constants and the activation energy.

Authors:  L A Frederico; T A Kunkel; B R Shaw
Journal:  Biochemistry       Date:  1990-03-13       Impact factor: 3.162

6.  Transcription-driven supercoiling of DNA: direct biochemical evidence from in vitro studies.

Authors:  Y P Tsao; H Y Wu; L F Liu
Journal:  Cell       Date:  1989-01-13       Impact factor: 41.582

7.  Transcription by RNA polymerase I stimulates mitotic recombination in Saccharomyces cerevisiae.

Authors:  S E Stewart; G S Roeder
Journal:  Mol Cell Biol       Date:  1989-08       Impact factor: 4.272

8.  Shutdown of class switch recombination by deletion of a switch region control element.

Authors:  S Jung; K Rajewsky; A Radbruch
Journal:  Science       Date:  1993-02-12       Impact factor: 47.728

9.  HPR1, a novel yeast gene that prevents intrachromosomal excision recombination, shows carboxy-terminal homology to the Saccharomyces cerevisiae TOP1 gene.

Authors:  A Aguilera; H L Klein
Journal:  Mol Cell Biol       Date:  1990-04       Impact factor: 4.272

10.  The strong ADH1 promoter stimulates mitotic and meiotic recombination at the ADE6 gene of Schizosaccharomyces pombe.

Authors:  C Grimm; P Schaer; P Munz; J Kohli
Journal:  Mol Cell Biol       Date:  1991-01       Impact factor: 4.272

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  159 in total

1.  The mRNA export machinery requires the novel Sac3p-Thp1p complex to dock at the nucleoplasmic entrance of the nuclear pores.

Authors:  Tamás Fischer; Katja Strässer; Attila Rácz; Susana Rodriguez-Navarro; Marisa Oppizzi; Petra Ihrig; Johannes Lechner; Ed Hurt
Journal:  EMBO J       Date:  2002-11-01       Impact factor: 11.598

2.  Rad52 function prevents chromosome loss and truncation in Candida albicans.

Authors:  E Andaluz; A Bellido; J Gómez-Raja; A Selmecki; K Bouchonville; R Calderone; J Berman; G Larriba
Journal:  Mol Microbiol       Date:  2011-01-27       Impact factor: 3.501

3.  Molecular cross-talk among chromosome fragility syndromes.

Authors:  Jordi Surrallés; Stephen P Jackson; Maria Jasin; Michael B Kastan; Stephen C West; Hans Joenje
Journal:  Genes Dev       Date:  2004-06-15       Impact factor: 11.361

4.  Decrease in topoisomerase I is responsible for activation-induced cytidine deaminase (AID)-dependent somatic hypermutation.

Authors:  Maki Kobayashi; Zahra Sabouri; Somayeh Sabouri; Yoko Kitawaki; Yves Pommier; Takaya Abe; Hiroshi Kiyonari; Tasuku Honjo
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-11       Impact factor: 11.205

5.  BLM helicase facilitates RNA polymerase I-mediated ribosomal RNA transcription.

Authors:  Patrick M Grierson; Kate Lillard; Gregory K Behbehani; Kelly A Combs; Saumitri Bhattacharyya; Samir Acharya; Joanna Groden
Journal:  Hum Mol Genet       Date:  2011-11-21       Impact factor: 6.150

Review 6.  RNA-guided genetic silencing systems in bacteria and archaea.

Authors:  Blake Wiedenheft; Samuel H Sternberg; Jennifer A Doudna
Journal:  Nature       Date:  2012-02-15       Impact factor: 49.962

7.  Translocation-capture sequencing reveals the extent and nature of chromosomal rearrangements in B lymphocytes.

Authors:  Isaac A Klein; Wolfgang Resch; Mila Jankovic; Thiago Oliveira; Arito Yamane; Hirotaka Nakahashi; Michela Di Virgilio; Anne Bothmer; Andre Nussenzweig; Davide F Robbiani; Rafael Casellas; Michel C Nussenzweig
Journal:  Cell       Date:  2011-09-30       Impact factor: 41.582

8.  Abasic sites in the transcribed strand of yeast DNA are removed by transcription-coupled nucleotide excision repair.

Authors:  Nayun Kim; Sue Jinks-Robertson
Journal:  Mol Cell Biol       Date:  2010-04-26       Impact factor: 4.272

9.  RecQL5 promotes genome stabilization through two parallel mechanisms--interacting with RNA polymerase II and acting as a helicase.

Authors:  M Nurul Islam; David Fox; Rong Guo; Takemi Enomoto; Weidong Wang
Journal:  Mol Cell Biol       Date:  2010-03-15       Impact factor: 4.272

Review 10.  Triggers for genomic rearrangements: insights into genomic, cellular and environmental influences.

Authors:  Ram-Shankar Mani; Arul M Chinnaiyan
Journal:  Nat Rev Genet       Date:  2010-11-03       Impact factor: 53.242

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