Literature DB >> 11792317

Phage genomics: small is beautiful.

Harald Brüssow1, Roger W Hendrix.   

Abstract

The Age of Genomics dawned only gradually for bacteriophages. It was 1977 when the genome of phage phi X174 was published and 1983 when the "large" genome of phage lambda hit the streets. More recently, the pace has quickened, so that we now have over 100 complete phage genomes and can expect thousands in a very few years. These sequences have been marvelously informative for the biology of the individual phages, but with the advent of high volume sequencing technology, the real excitement for phage biology is that it is now possible to analyze the sequences together and thereby address--for the first time at whole genome resolution--a set of fundamental biological questions related to populations: What is the structure of the global phage population? What are its dynamics? How do phages evolve? This is Comparative Genomics with a capital "C".

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Year:  2002        PMID: 11792317     DOI: 10.1016/s0092-8674(01)00637-7

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  182 in total

1.  Imbroglios of viral taxonomy: genetic exchange and failings of phenetic approaches.

Authors:  Jeffrey G Lawrence; Graham F Hatfull; Roger W Hendrix
Journal:  J Bacteriol       Date:  2002-09       Impact factor: 3.490

2.  Genomic sequence of C1, the first streptococcal phage.

Authors:  Daniel Nelson; Raymond Schuch; Shiwei Zhu; Donna M Tscherne; Vincent A Fischetti
Journal:  J Bacteriol       Date:  2003-06       Impact factor: 3.490

3.  Integration and distribution of Lactobacillus johnsonii prophages.

Authors:  Marco Ventura; Carlos Canchaya; David Pridmore; Bernard Berger; Harald Brüssow
Journal:  J Bacteriol       Date:  2003-08       Impact factor: 3.490

Review 4.  Phages and the evolution of bacterial pathogens: from genomic rearrangements to lysogenic conversion.

Authors:  Harald Brüssow; Carlos Canchaya; Wolf-Dietrich Hardt
Journal:  Microbiol Mol Biol Rev       Date:  2004-09       Impact factor: 11.056

5.  Haloviruses HF1 and HF2: evidence for a recent and large recombination event.

Authors:  Sen-Lin Tang; Stewart Nuttall; Mike Dyall-Smith
Journal:  J Bacteriol       Date:  2004-05       Impact factor: 3.490

6.  Crystal structure of Bacillus subtilis SPP1 phage gp23.1, a putative chaperone.

Authors:  David Veesler; Stéphanie Blangy; Julie Lichière; Miguel Ortiz-Lombardía; Paulo Tavares; Valérie Campanacci; Christian Cambillau
Journal:  Protein Sci       Date:  2010-09       Impact factor: 6.725

7.  Crystal structure of Bacillus subtilis SPP1 phage gp22 shares fold similarity with a domain of lactococcal phage p2 RBP.

Authors:  David Veesler; Stéphanie Blangy; Silvia Spinelli; Paulo Tavares; Valérie Campanacci; Christian Cambillau
Journal:  Protein Sci       Date:  2010-07       Impact factor: 6.725

Review 8.  Bacteriophage resistance mechanisms.

Authors:  Simon J Labrie; Julie E Samson; Sylvain Moineau
Journal:  Nat Rev Microbiol       Date:  2010-03-29       Impact factor: 60.633

Review 9.  Impact of CRISPR immunity on the emergence and virulence of bacterial pathogens.

Authors:  Asma Hatoum-Aslan; Luciano A Marraffini
Journal:  Curr Opin Microbiol       Date:  2013-12-29       Impact factor: 7.934

10.  Gene function prediction based on genomic context clustering and discriminative learning: an application to bacteriophages.

Authors:  Jason Li; Saman K Halgamuge; Christopher I Kells; Sen-Lin Tang
Journal:  BMC Bioinformatics       Date:  2007-05-22       Impact factor: 3.169

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