Literature DB >> 11790331

Cyclohexadienyl dehydrogenase from Pseudomonas stutzeri exemplifies a widespread type of tyrosine-pathway dehydrogenase in the TyrA protein family.

G Xie1, C A Bonner, R A Jensen.   

Abstract

The uni-domain cyclohexadienyl dehydrogenases are able to use the alternative intermediates of tyrosine biosynthesis, prephenate or L-arogenate, as substrates. Members of this TyrA protein family have been generally considered to fall into two classes: sensitive or insensitive to feedback inhibition by L-tyrosine. A gene (tyrA(c)) encoding a cyclohexadienyl dehydrogenase from Pseudomonas stutzeri JM300 was cloned, sequenced, and expressed at a high level in Escherichia coli. This is the first molecular-genetic and biochemical characterization of a purified protein representing the feedback-sensitive type of cyclohexadienyl dehydrogenase. The catalytic-efficiency constant k(cat)/K(m) for prephenate (7.0x10(7) M/s) was much better than that of L-arogenate (5.7x10(6) M/s). TyrA(c) was sensitive to feedback inhibition by either L-tyrosine or 4-hydroxyphenylpyruvate, competitively with respect to either prephenate or L-arogenate and non-competitively with respect to NAD(+). A variety of related compounds were tested as inhibitors, and the minimal inhibitor structure was found to require only the aromatic ring and a hydroxyl substituent. Analysis by multiple alignment was used to compare 17 protein sequences representing TyrA family members having catalytic domains that are independent or fused to other catalytic domains, that exhibit broad substrate specificity or narrow substrate specificity, and that possess or lack sensitivity to endproduct inhibitors. We propose that the entire TyrA protein family lacks a discrete allosteric domain and that inhibitors act competitively at the catalytic site of different family members which exhibit individuality in the range and extent of molecules recognized as substrate or inhibitor.

Entities:  

Mesh:

Substances:

Year:  2000        PMID: 11790331     DOI: 10.1016/s0742-8413(99)00090-0

Source DB:  PubMed          Journal:  Comp Biochem Physiol C Toxicol Pharmacol        ISSN: 1532-0456            Impact factor:   3.228


  10 in total

Review 1.  Cohesion group approach for evolutionary analysis of TyrA, a protein family with wide-ranging substrate specificities.

Authors:  Carol A Bonner; Terrence Disz; Kaitlyn Hwang; Jian Song; Veronika Vonstein; Ross Overbeek; Roy A Jensen
Journal:  Microbiol Mol Biol Rev       Date:  2008-03       Impact factor: 11.056

2.  Biochemical characterization of prephenate dehydrogenase from the hyperthermophilic bacterium Aquifex aeolicus.

Authors:  Julie Bonvin; Raphael A Aponte; Maria Marcantonio; Sasha Singh; Dinesh Christendat; Joanne L Turnbull
Journal:  Protein Sci       Date:  2006-06       Impact factor: 6.725

3.  Metabolic engineering of Escherichia coli for L-tyrosine production by expression of genes coding for the chorismate mutase domain of the native chorismate mutase-prephenate dehydratase and a cyclohexadienyl dehydrogenase from Zymomonas mobilis.

Authors:  María I Chávez-Béjar; Alvaro R Lara; Hezraí López; Georgina Hernández-Chávez; Alfredo Martinez; Octavio T Ramírez; Francisco Bolívar; Guillermo Gosset
Journal:  Appl Environ Microbiol       Date:  2008-03-14       Impact factor: 4.792

4.  The structure of Haemophilus influenzae prephenate dehydrogenase suggests unique features of bifunctional TyrA enzymes.

Authors:  Hsiu Ju Chiu; Polat Abdubek; Tamara Astakhova; Herbert L Axelrod; Dennis Carlton; Thomas Clayton; Debanu Das; Marc C Deller; Lian Duan; Julie Feuerhelm; Joanna C Grant; Anna Grzechnik; Gye Won Han; Lukasz Jaroszewski; Kevin K Jin; Heath E Klock; Mark W Knuth; Piotr Kozbial; S Sri Krishna; Abhinav Kumar; David Marciano; Daniel McMullan; Mitchell D Miller; Andrew T Morse; Edward Nigoghossian; Linda Okach; Ron Reyes; Henry J Tien; Christine B Trame; Henry van den Bedem; Dana Weekes; Qingping Xu; Keith O Hodgson; John Wooley; Marc André Elsliger; Ashley M Deacon; Adam Godzik; Scott A Lesley; Ian A Wilson
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-07-31

5.  The crystal structure of Aquifex aeolicus prephenate dehydrogenase reveals the mode of tyrosine inhibition.

Authors:  Warren Sun; Dea Shahinas; Julie Bonvin; Wenjuan Hou; Matthew S Kimber; Joanne Turnbull; Dinesh Christendat
Journal:  J Biol Chem       Date:  2009-03-10       Impact factor: 5.157

Review 6.  Ancient origin of the tryptophan operon and the dynamics of evolutionary change.

Authors:  Gary Xie; Nemat O Keyhani; Carol A Bonner; Roy A Jensen
Journal:  Microbiol Mol Biol Rev       Date:  2003-09       Impact factor: 11.056

7.  A core catalytic domain of the TyrA protein family: arogenate dehydrogenase from Synechocystis.

Authors:  Carol A Bonner; Roy A Jensen; John E Gander; Nemat O Keyhani
Journal:  Biochem J       Date:  2004-08-15       Impact factor: 3.857

8.  Characterization of two key enzymes for aromatic amino acid biosynthesis in symbiotic archaea.

Authors:  Irina Shlaifer; Joanne L Turnbull
Journal:  Extremophiles       Date:  2016-06-11       Impact factor: 2.395

9.  Lateral gene transfer and ancient paralogy of operons containing redundant copies of tryptophan-pathway genes in Xylella species and in heterocystous cyanobacteria.

Authors:  Gary Xie; Carol A Bonner; Tom Brettin; Raphael Gottardo; Nemat O Keyhani; Roy A Jensen
Journal:  Genome Biol       Date:  2003-01-29       Impact factor: 13.583

10.  The TyrA family of aromatic-pathway dehydrogenases in phylogenetic context.

Authors:  Jian Song; Carol A Bonner; Murray Wolinsky; Roy A Jensen
Journal:  BMC Biol       Date:  2005-05-12       Impact factor: 7.431

  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.