Literature DB >> 11773415

The g5R (D250) gene of African swine fever virus encodes a Nudix hydrolase that preferentially degrades diphosphoinositol polyphosphates.

Jared L Cartwright1, Stephen T Safrany, Linda K Dixon, Edward Darzynkiewicz, Janusz Stepinski, Richard Burke, Alexander G McLennan.   

Abstract

The African swine fever virus (ASFV) g5R gene encodes a protein containing a Nudix hydrolase motif which in terms of sequence appears most closely related to the mammalian diadenosine tetraphosphate (Ap4A) hydrolases. However, purified recombinant g5R protein (g5Rp) showed a much wider range of nucleotide substrate specificity compared to eukaryotic Ap4A hydrolases, having highest activity with GTP, followed by adenosine 5'-pentaphosphate (p5A) and dGTP. Diadenosine and diguanosine nucleotides were substrates, but the enzyme showed no activity with cap analogues such as 7mGp3A. In common with eukaryotic diadenosine hexaphosphate (Ap6A) hydrolases, which prefer higher-order polyphosphates as substrates, g5Rp also hydrolyzes the diphosphoinositol polyphosphates PP-InsP5 and [PP]2-InsP4. A comparison of the kinetics of substrate utilization showed that the k(cat)/K(m) ratio for PP-InsP5 is 60-fold higher than that for GTP, which allows classification of g5R as a novel diphosphoinositol polyphosphate phosphohydrolase (DIPP). Unlike mammalian DIPP, g5Rp appeared to preferentially remove the 5-beta-phosphate from both PP-InsP5 and [PP]2-InsP4. ASFV infection led to a reduction in the levels of PP-InsP5, ATP and GTP by ca. 50% at late times postinfection. The measured intracellular concentrations of these compounds were comparable to the respective K(m) values of g5Rp, suggesting that one or all of these may be substrates for g5Rp during ASFV infection. Transfection of ASFV-infected Vero cells with a plasmid encoding epitope-tagged g5Rp suggested localization of this protein in the rough endoplasmic reticulum. These results suggest a possible role for g5Rp in regulating a stage of viral morphogenesis involving diphosphoinositol polyphosphate-mediated membrane trafficking.

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Year:  2002        PMID: 11773415      PMCID: PMC135849          DOI: 10.1128/jvi.76.3.1415-1421.2002

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  24 in total

Review 1.  The MutT proteins or "Nudix" hydrolases, a family of versatile, widely distributed, "housecleaning" enzymes.

Authors:  M J Bessman; D N Frick; S F O'Handley
Journal:  J Biol Chem       Date:  1996-10-11       Impact factor: 5.157

2.  Molecular cloning and restriction enzyme mapping of an African swine fever virus isolate from Malawi.

Authors:  L K Dixon
Journal:  J Gen Virol       Date:  1988-07       Impact factor: 3.891

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Authors:  G L Peterson
Journal:  Methods Enzymol       Date:  1983       Impact factor: 1.600

4.  The IalA invasion gene of Bartonella bacilliformis encodes a (de)nucleoside polyphosphate hydrolase of the MutT motif family and has homologs in other invasive bacteria.

Authors:  J L Cartwright; P Britton; M F Minnick; A G McLennan
Journal:  Biochem Biophys Res Commun       Date:  1999-03-24       Impact factor: 3.575

5.  The Saccharomyces cerevisiae YOR163w gene encodes a diadenosine 5', 5"'-P1,P6-hexaphosphate (Ap6A) hydrolase member of the MutT motif (Nudix hydrolase) family.

Authors:  J L Cartwright; A G McLennan
Journal:  J Biol Chem       Date:  1999-03-26       Impact factor: 5.157

6.  African swine fever virus is wrapped by the endoplasmic reticulum.

Authors:  I Rouiller; S M Brookes; A D Hyatt; M Windsor; T Wileman
Journal:  J Virol       Date:  1998-03       Impact factor: 5.103

7.  Molecular cloning and expression of a rat hepatic multiple inositol polyphosphate phosphatase.

Authors:  A Craxton; J J Caffrey; W Burkhart; S T Safrany; S B Shears
Journal:  Biochem J       Date:  1997-11-15       Impact factor: 3.857

8.  Turnover of bis-diphosphoinositol tetrakisphosphate in a smooth muscle cell line is regulated by beta2-adrenergic receptors through a cAMP-mediated, A-kinase-independent mechanism.

Authors:  S T Safrany; S B Shears
Journal:  EMBO J       Date:  1998-03-16       Impact factor: 11.598

9.  Down regulation of gene expression by the vaccinia virus D10 protein.

Authors:  T Shors; J G Keck; B Moss
Journal:  J Virol       Date:  1999-01       Impact factor: 5.103

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Authors:  S B Shears; N Ali; A Craxton; M E Bembenek
Journal:  J Biol Chem       Date:  1995-05-05       Impact factor: 5.157

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  17 in total

1.  Characterization of a vaccinia virus mutant with a deletion of the D10R gene encoding a putative negative regulator of gene expression.

Authors:  Susan Parrish; Bernard Moss
Journal:  J Virol       Date:  2006-01       Impact factor: 5.103

2.  Paralogous murine Nudt10 and Nudt11 genes have differential expression patterns but encode identical proteins that are physiologically competent diphosphoinositol polyphosphate phosphohydrolases.

Authors:  Len V Hua; Kiyoshi Hidaka; Xavier Pesesse; Larry D Barnes; Stephen B Shears
Journal:  Biochem J       Date:  2003-07-01       Impact factor: 3.857

3.  Legionella pneumophila NudA Is a Nudix hydrolase and virulence factor.

Authors:  Paul H Edelstein; Baofeng Hu; Takashi Shinzato; Martha A C Edelstein; Wenlian Xu; Maurice J Bessman
Journal:  Infect Immun       Date:  2005-10       Impact factor: 3.441

Review 4.  The Role of Viral RNA Degrading Factors in Shutoff of Host Gene Expression.

Authors:  Léa Gaucherand; Marta Maria Gaglia
Journal:  Annu Rev Virol       Date:  2022-06-07       Impact factor: 14.263

5.  The African swine fever virus protein j4R binds to the alpha chain of nascent polypeptide-associated complex.

Authors:  Lynnette C Goatley; Steve R F Twigg; James E Miskin; Paul Monaghan; René St-Arnaud; Geoffrey L Smith; Linda K Dixon
Journal:  J Virol       Date:  2002-10       Impact factor: 5.103

6.  Vaccinia virus D10 protein has mRNA decapping activity, providing a mechanism for control of host and viral gene expression.

Authors:  Susan Parrish; Wolfgang Resch; Bernard Moss
Journal:  Proc Natl Acad Sci U S A       Date:  2007-02-05       Impact factor: 11.205

7.  The African swine fever virus g5R protein possesses mRNA decapping activity.

Authors:  Susan Parrish; Megan Hurchalla; Shin-Wu Liu; Bernard Moss
Journal:  Virology       Date:  2009-08-19       Impact factor: 3.616

Review 8.  Inositol pyrophosphates: structure, enzymology and function.

Authors:  Christopher John Barker; Christopher Illies; Gian Carlo Gaboardi; Per-Olof Berggren
Journal:  Cell Mol Life Sci       Date:  2009-08-28       Impact factor: 9.261

9.  Substrate ambiguity among the nudix hydrolases: biologically significant, evolutionary remnant, or both?

Authors:  Alexander G McLennan
Journal:  Cell Mol Life Sci       Date:  2012-11-27       Impact factor: 9.261

10.  Structure based prediction of functional sites with potential inhibitors to Nudix enzymes from disease causing microbes.

Authors:  Ashwani Sharma; Ashish Vijay Tendulkar; Pramod Prabhakar Wangikar
Journal:  Bioinformation       Date:  2011-01-22
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