Literature DB >> 11771141

[Locus-controlling regions: description in the LCR-TRRD data base].

O A Podkolodnaia1, V G Levitskiĭ, N L Podkolodnyĭ.   

Abstract

The structural and functional organization of locus control regions (LCR) was analyzed using data of the LCR-TRR Database. The role of several transcription factors in the LCR function was considered. A study was made of the possible nucleosomal packing of enhancer regions in LCR. The structure and the format of LCR-TRRD are described. The database has been constructed for SRS and is available at http://wwwmgs.bionet.nsc.ru/mgs/dbase/LCR/.

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Year:  2001        PMID： 11771141

Source DB:  PubMed          Journal:  Mol Biol (Mosk)        ISSN： 0026-8984


  3 in total

1.  RECON: a program for prediction of nucleosome formation potential.

Authors:  Victor G Levitsky
Journal:  Nucleic Acids Res       Date:  2004-07-01       Impact factor: 16.971

2.  NPRD: Nucleosome Positioning Region Database.

Authors:  Victor G Levitsky; Aleksey V Katokhin; Olga A Podkolodnaya; Dagmara P Furman; Nikolay A Kolchanov
Journal:  Nucleic Acids Res       Date:  2005-01-01       Impact factor: 16.971

3.  Effective transcription factor binding site prediction using a combination of optimization, a genetic algorithm and discriminant analysis to capture distant interactions.

Authors:  Victor G Levitsky; Elena V Ignatieva; Elena A Ananko; Igor I Turnaev; Tatyana I Merkulova; Nikolay A Kolchanov; T C Hodgman
Journal:  BMC Bioinformatics       Date:  2007-12-19       Impact factor: 3.169
  3 in total

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