Literature DB >> 11753384

Towards genetic genome projects: genomic library screening and gene-targeting vector construction in a single step.

Pumin Zhang1, Mamei Z Li, Stephen J Elledge.   

Abstract

We have developed technologies that simplify genomic library construction and screening, substantially reducing both the time and the cost associated with traditional library screening methods and facilitating the generation of gene-targeting constructs. By taking advantage of homologous recombination in Escherichia coli, we were able to use as little as 80 bp of total sequence homology to screen for a specific gene from a genomic library in plasmid or phage form. This method, called recombination cloning (REC), takes only a few days instead of the several weeks required for traditional plaque-lift methods. In addition, because every clone in the mouse genomic library we have constructed has a negative selection marker adjacent to the genomic insert, REC screening can generate gene-targeting vectors in one step, from library screening to finished construct. Conditional targeting constructs can be generated easily with minimal additional manipulation.

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Year:  2001        PMID: 11753384     DOI: 10.1038/ng797

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  37 in total

1.  Mice with the R176Q cardiac ryanodine receptor mutation exhibit catecholamine-induced ventricular tachycardia and cardiomyopathy.

Authors:  Prince J Kannankeril; Brett M Mitchell; Sanjeewa A Goonasekera; Mihail G Chelu; Wei Zhang; Subeena Sood; Debra L Kearney; Cristina I Danila; Mariella De Biasi; Xander H T Wehrens; Robia G Pautler; Dan M Roden; George E Taffet; Robert T Dirksen; Mark E Anderson; Susan L Hamilton
Journal:  Proc Natl Acad Sci U S A       Date:  2006-07-27       Impact factor: 11.205

2.  Disruption of ubiquitin specific protease 26 gene causes male subfertility associated with spermatogenesis defects in mice†.

Authors:  Hong Tian; Yongwei Huo; Jie Zhang; Shangshu Ding; Zhiyong Wang; Hecheng Li; Lirong Wang; Ming Lu; Sen Liu; Shudong Qiu; Qiuyang Zhang
Journal:  Biol Reprod       Date:  2019-04-01       Impact factor: 4.285

3.  Three gene-targeted mouse models of RNA splicing factor RP show late-onset RPE and retinal degeneration.

Authors:  John J Graziotto; Michael H Farkas; Kinga Bujakowska; Bertrand M Deramaudt; Qi Zhang; Emeline F Nandrot; Chris F Inglehearn; Shomi S Bhattacharya; Eric A Pierce
Journal:  Invest Ophthalmol Vis Sci       Date:  2011-01-05       Impact factor: 4.799

4.  Hyper-SUMOylation of the Kv7 potassium channel diminishes the M-current leading to seizures and sudden death.

Authors:  Yitao Qi; Jingxiong Wang; Valerie C Bomben; De-Pei Li; Shao-Rui Chen; Hao Sun; Yutao Xi; John G Reed; Jinke Cheng; Hui-Lin Pan; Jeffrey L Noebels; Edward T H Yeh
Journal:  Neuron       Date:  2014-09-03       Impact factor: 17.173

5.  Toward improving Caenorhabditis elegans phenome mapping with an ORFeome-based RNAi library.

Authors:  Jean-François Rual; Julian Ceron; John Koreth; Tong Hao; Anne-Sophie Nicot; Tomoko Hirozane-Kishikawa; Jean Vandenhaute; Stuart H Orkin; David E Hill; Sander van den Heuvel; Marc Vidal
Journal:  Genome Res       Date:  2004-10       Impact factor: 9.043

6.  Calmodulin kinase II-mediated sarcoplasmic reticulum Ca2+ leak promotes atrial fibrillation in mice.

Authors:  Mihail G Chelu; Satyam Sarma; Subeena Sood; Sufen Wang; Ralph J van Oort; Darlene G Skapura; Na Li; Marco Santonastasi; Frank Ulrich Müller; Wilhelm Schmitz; Ulrich Schotten; Mark E Anderson; Miguel Valderrábano; Dobromir Dobrev; Xander H T Wehrens
Journal:  J Clin Invest       Date:  2009-07       Impact factor: 14.808

7.  The fat mass and obesity associated gene FTO functions in the brain to regulate postnatal growth in mice.

Authors:  Xue Gao; Yong-Hyun Shin; Min Li; Fei Wang; Qiang Tong; Pumin Zhang
Journal:  PLoS One       Date:  2010-11-16       Impact factor: 3.240

8.  A new method for rapidly generating gene-targeting vectors by engineering BACs through homologous recombination in bacteria.

Authors:  Vinicius Cotta-de-Almeida; Susan Schonhoff; Tomoyuki Shibata; Andrew Leiter; Scott B Snapper
Journal:  Genome Res       Date:  2003-08-12       Impact factor: 9.043

9.  The cyclin E/Cdk2 substrate and Cajal body component p220(NPAT) activates histone transcription through a novel LisH-like domain.

Authors:  Yue Wei; Jianping Jin; J Wade Harper
Journal:  Mol Cell Biol       Date:  2003-05       Impact factor: 4.272

10.  Loss of spindle assembly checkpoint-mediated inhibition of Cdc20 promotes tumorigenesis in mice.

Authors:  Min Li; Xiao Fang; Zhubo Wei; J Philippe York; Pumin Zhang
Journal:  J Cell Biol       Date:  2009-06-15       Impact factor: 10.539

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