Literature DB >> 11752706

Frequency-dependent selection in human immunodeficiency virus type 1.

Eloisa Yuste1, Andrés Moya2, Cecilio López-Galíndez1.   

Abstract

Genetic variation is the main evolutionary strategy adopted by RNA viruses and retroviruses. Evolution operates through competition between different individuals in the same environment, resulting in the imposition of the fittest variant. The process of competition could be affected by various factors, including the frequency of the different competing individuals. In order to investigate this aspect, individual virus populations derived from a human immunodeficiency virus type 1 isolate were studied at different competing proportions. The dynamics of variant imposition in each competition experiment permitted the detection of frequency-dependent selection (FDS); i.e. the imposition of variants is related to their biological fitness, which is also affected by the proportions at which they compete. The existence of FDS in different viruses with RNA genomes would indicate a general mechanism favouring genetic heterogeneity.

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Year:  2002        PMID: 11752706     DOI: 10.1099/0022-1317-83-1-103

Source DB:  PubMed          Journal:  J Gen Virol        ISSN: 0022-1317            Impact factor:   3.891


  6 in total

1.  Frequency-Dependent Selection in a Periodic Environment.

Authors:  Robert Forster; Claus O Wilke
Journal:  Physica A       Date:  2007-07-15       Impact factor: 3.263

2.  Frequency-dependent selection and the maintenance of genetic variation: exploring the parameter space of the multiallelic pairwise interaction model.

Authors:  Meredith V Trotter; Hamish G Spencer
Journal:  Genetics       Date:  2007-05-04       Impact factor: 4.562

3.  Functional Incompatibility between the Generic NF-κB Motif and a Subtype-Specific Sp1III Element Drives the Formation of the HIV-1 Subtype C Viral Promoter.

Authors:  Anjali Verma; Pavithra Rajagopalan; Rishikesh Lotke; Rebu Varghese; Deepak Selvam; Tapas K Kundu; Udaykumar Ranga
Journal:  J Virol       Date:  2016-07-27       Impact factor: 5.103

4.  Daily sampling of an HIV-1 patient with slowly progressing disease displays persistence of multiple env subpopulations consistent with neutrality.

Authors:  Helena Skar; Ryan N Gutenkunst; Karin Wilbe Ramsay; Annette Alaeus; Jan Albert; Thomas Leitner
Journal:  PLoS One       Date:  2011-08-02       Impact factor: 3.240

5.  Validating viral quasispecies with digital organisms: a re-examination of the critical mutation rate.

Authors:  Iñaki Comas; Andrés Moya; Fernando González-Candelas
Journal:  BMC Evol Biol       Date:  2005-01-15       Impact factor: 3.260

6.  Beneficial coinfection can promote within-host viral diversity.

Authors:  Asher Leeks; Ernesto A Segredo-Otero; Rafael Sanjuán; Stuart A West
Journal:  Virus Evol       Date:  2018-10-01
  6 in total

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