Literature DB >> 11750667

Prediction of organellar targeting signals.

O Emanuelsson1, G von Heijne.   

Abstract

The subcellular location of a protein is an important characteristic with functional implications, and hence the problem of predicting subcellular localization from the amino acid sequence has received a fair amount of attention from the bioinformatics community. This review attempts to summarize the present state of the art in the field.

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Year:  2001        PMID： 11750667     DOI： 10.1016/s0167-4889(01)00145-8

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN： 0006-3002


  62 in total

1.  The predicted candidates of Arabidopsis plastid inner envelope membrane proteins and their expression profiles.

Authors:  Abraham J K Koo; John B Ohlrogge
Journal:  Plant Physiol       Date:  2002-10       Impact factor: 8.340

2.  Cleavage of the Pseudomonas syringae type III effector AvrRpt2 requires a host factor(s) common among eukaryotes and is important for AvrRpt2 localization in the host cell.

Authors:  Ping Jin; Michelle D Wood; Yan Wu; Zhiyi Xie; Fumiaki Katagiri
Journal:  Plant Physiol       Date:  2003-10-02       Impact factor: 8.340

3.  Prediction of the plant beta-barrel proteome: a case study of the chloroplast outer envelope.

Authors:  Enrico Schleiff; Lutz Andreas Eichacker; Kerstin Eckart; Thomas Becker; Oliver Mirus; Tanja Stahl; Jürgen Soll
Journal:  Protein Sci       Date:  2003-04       Impact factor: 6.725

4.  Cytokinin-deficient transgenic Arabidopsis plants show multiple developmental alterations indicating opposite functions of cytokinins in the regulation of shoot and root meristem activity.

Authors:  Tomás Werner; Václav Motyka; Valérie Laucou; Rafaël Smets; Harry Van Onckelen; Thomas Schmülling
Journal:  Plant Cell       Date:  2003-10-10       Impact factor: 11.277

5.  LumenP--a neural network predictor for protein localization in the thylakoid lumen.

Authors:  Isabelle Westerlund; Gunnar Von Heijne; Olof Emanuelsson
Journal:  Protein Sci       Date:  2003-10       Impact factor: 6.725

6.  Intracellular localization of Arabidopsis sulfurtransferases.

Authors:  Michael Bauer; Christof Dietrich; Katharina Nowak; Walter D Sierralta; Jutta Papenbrock
Journal:  Plant Physiol       Date:  2004-06-04       Impact factor: 8.340

7.  Analysis of curated and predicted plastid subproteomes of Arabidopsis. Subcellular compartmentalization leads to distinctive proteome properties.

Authors:  Qi Sun; Olof Emanuelsson; Klaas J van Wijk
Journal:  Plant Physiol       Date:  2004-06       Impact factor: 8.340

8.  DNA gyrase is involved in chloroplast nucleoid partitioning.

Authors:  Hye Sun Cho; Sang Sook Lee; Kwang Dong Kim; Inhwan Hwang; Jong-Seok Lim; Youn-Il Park; Hyun-Sook Pai
Journal:  Plant Cell       Date:  2004-09-14       Impact factor: 11.277

9.  A genomic integration method for the simultaneous visualization of endogenous mRNAs and their translation products in living yeast.

Authors:  Liora Haim-Vilmovsky; Noga Gadir; Rebecca H Herbst; Jeffrey E Gerst
Journal:  RNA       Date:  2011-10-24       Impact factor: 4.942

10.  Human mitochondrial peptide deformylase, a new anticancer target of actinonin-based antibiotics.

Authors:  Mona D Lee; Yuhong She; Michael J Soskis; Christopher P Borella; Jeffrey R Gardner; Paula A Hayes; Benzon M Dy; Mark L Heaney; Mark R Philips; William G Bornmann; Francis M Sirotnak; David A Scheinberg
Journal:  J Clin Invest       Date:  2004-10       Impact factor: 14.808
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