Literature DB >> 11750123

The universal ancestor was a thermophile or a hyperthermophile.

M Di Giulio1.   

Abstract

By exploiting the correlation between the optimal growth temperature of organisms and a thermophily index based on the propensity of amino acids to enter thermophile/hyperthermophile proteins, an analysis is conducted in order to establish whether the last universal common ancestor (LUCA) was a mesophile or a (hyper)thermophile. This objective is reached by using maximum parsimony and maximum likelihood to reconstruct the ancestral sequences of the LUCA for two pairs of sets of paralogous protein sequences by means of the phylogenetic tree topology derived from the small subunit ribosomal RNA, even if this is rooted in all three possible ways. The thermophily index of all the reconstructed ancestral sequences of the LUCA belongs to the set of the thermophile/hyperthermophile sequences, thus supporting the hypotheses that see the LUCA as a thermophile or a hyperthermophile.

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Year:  2001        PMID: 11750123     DOI: 10.1016/s0378-1119(01)00781-8

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  8 in total

1.  The universal ancestor and the ancestor of bacteria were hyperthermophiles.

Authors:  Massimo Di Giulio
Journal:  J Mol Evol       Date:  2003-12       Impact factor: 2.395

2.  One-step formation of oligopeptide-like molecules from Glu and Asp in hydrothermal environments.

Authors:  Kunio Kawamura; Masanori Shimahashi
Journal:  Naturwissenschaften       Date:  2008-02-06

Review 3.  The last universal common ancestor: emergence, constitution and genetic legacy of an elusive forerunner.

Authors:  Nicolas Glansdorff; Ying Xu; Bernard Labedan
Journal:  Biol Direct       Date:  2008-07-09       Impact factor: 4.540

4.  Revisiting the Relationships Between Genomic G + C Content, RNA Secondary Structures, and Optimal Growth Temperature.

Authors:  Michelle M Meyer
Journal:  J Mol Evol       Date:  2020-11-20       Impact factor: 2.395

5.  An Interpretation of the Ancestral Codon from Miller's Amino Acids and Nucleotide Correlations in Modern Coding Sequences.

Authors:  Nicolas Carels; Miguel Ponce de Leon
Journal:  Bioinform Biol Insights       Date:  2015-04-15

6.  Computational Identification of Amino-Acid Mutations that Further Improve the Activity of a Chalcone-Flavonone Isomerase from Glycine max.

Authors:  Hui Yuan; Jiaqi Wu; Xiaoqiang Wang; Jiakuan Chen; Yang Zhong; Qiang Huang; Peng Nan
Journal:  Front Plant Sci       Date:  2017-02-24       Impact factor: 5.753

7.  Algorithms for computing parsimonious evolutionary scenarios for genome evolution, the last universal common ancestor and dominance of horizontal gene transfer in the evolution of prokaryotes.

Authors:  Boris G Mirkin; Trevor I Fenner; Michael Y Galperin; Eugene V Koonin
Journal:  BMC Evol Biol       Date:  2003-01-06       Impact factor: 3.260

8.  The Role of Meteorite Impacts in the Origin of Life.

Authors:  G R Osinski; C S Cockell; A Pontefract; H M Sapers
Journal:  Astrobiology       Date:  2020-09-01       Impact factor: 4.335

  8 in total

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