Literature DB >> 11749196

Structure and dynamics of self-assembling beta-sheet peptide tapes by dynamic light scattering.

A Aggeli1, G Fytas, D Vlassopoulos, T C McLeish, P J Mawer, N Boden.   

Abstract

Oligomeric peptides can be designed which undergo one-dimensional self-assembly in solution to form beta-sheet tapes a single molecule in thickness and micrometers in length.(1) In this paper, we present the first systematic investigation of the size, shape, dynamics, and interactions of beta-sheet tapes formed by a self-assembling 24-residue peptide, K24, in 2-chloroethanol, over a wide range of peptide concentrations c (c: 10(-7)-1 mM), using photon correlation spectroscopy. The tapes behave like semiflexible chains with persistence lengths of several hundred nanometers and much longer contour lengths, even at c approximately 0.1 nM. The polarized q-dependent light-scattering intensity I fits a model of a prolate object with major and minor axes alpha approximately 630 nm and beta approximately 40 nm. This is an unexpected result in view of the previous theoretical predictions that tapelike polymers could form oblate coinlike structures in solution.(2) This experimentally observed behavior is attributed to the pronounced twist and bend of the beta-tapes, which do not allow them to form the coinlike structures, but instead they favor the formation of elongated polymers. At c approximately 10(-2) mM, the tapes are seen to start overlapping and forming networks with unusually large mesh sizes (e.g., ca. 400 nm at 15 mciroM), much larger than those of conventional polymers. With increasing peptide concentration the mesh size decreases and the network becomes a physical gel at c approximately 0.4 mM. These semidilute solutions are characterized by one main relaxation mode associated with the cooperative diffusion of the entangled tape network, and a weaker slower mode, associated with gel cluster formation. The concentration dependence of xi (xi(c) approximately c(-0.34)) is much weaker compared to the expected scaling for Gaussian or swollen chains (xi(c) approximately c(-1) for Gaussian chains, or xi(c) approximately c(-3/4) for swollen ones), but is not inconsistent with the expected scaling for rigid rods. On the basis of the concentration dependencies of the light-scattering intensity I and of the cooperative diffusion coefficient D, the cooperative friction coefficient f(c) is found to display a stronger concentration dependence (f(c) approximately c(1.34)) than in the case of semidilute flexible and semiflexible polymer solutions (f(c) approximately c(0.5)).(3) Thus, we may conclude that the network of entangled tapes approximates in its behavior that of semirigid polymers.

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Year:  2001        PMID: 11749196     DOI: 10.1021/bm000080z

Source DB:  PubMed          Journal:  Biomacromolecules        ISSN: 1525-7797            Impact factor:   6.988


  9 in total

1.  The mechanism of amyloid spherulite formation by bovine insulin.

Authors:  M R H Krebs; E H C Bromley; S S Rogers; A M Donald
Journal:  Biophys J       Date:  2004-12-13       Impact factor: 4.033

2.  Atomic structures of peptide self-assembly mimics.

Authors:  Koki Makabe; Dan McElheny; Valentia Tereshko; Aaron Hilyard; Grzegorz Gawlak; Shude Yan; Akiko Koide; Shohei Koide
Journal:  Proc Natl Acad Sci U S A       Date:  2006-11-08       Impact factor: 11.205

3.  Structure of core domain of fibril-forming PHF/Tau fragments.

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Journal:  Biophys J       Date:  2005-12-09       Impact factor: 4.033

4.  Investigating the effects of N-terminal acetylation on KFE8 self-assembly with 2D IR spectroscopy.

Authors:  William B Weeks; Craig J Tainter; Lauren E Buchanan
Journal:  Biophys J       Date:  2022-03-03       Impact factor: 3.699

5.  The formation of spherulites by amyloid fibrils of bovine insulin.

Authors:  Mark R H Krebs; Cait E Macphee; Aline F Miller; Iain E Dunlop; Christopher M Dobson; Athene M Donald
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-20       Impact factor: 11.205

Review 6.  Protein folding and assembly in confined environments: Implications for protein aggregation in hydrogels and tissues.

Authors:  Laura W Simpson; Theresa A Good; Jennie B Leach
Journal:  Biotechnol Adv       Date:  2020-06-06       Impact factor: 14.227

Review 7.  Harnessing self-assembled peptide nanoparticles in epitope vaccine design.

Authors:  Manica Negahdaripour; Nasim Golkar; Nasim Hajighahramani; Sedigheh Kianpour; Navid Nezafat; Younes Ghasemi
Journal:  Biotechnol Adv       Date:  2017-05-15       Impact factor: 14.227

8.  Treatment of early caries lesions using biomimetic self-assembling peptides--a clinical safety trial.

Authors:  P A Brunton; R P W Davies; J L Burke; A Smith; A Aggeli; S J Brookes; J Kirkham
Journal:  Br Dent J       Date:  2013-08       Impact factor: 1.626

9.  Effect of the caries-protective self-assembling peptide P11-4 on shear bond strength of metal brackets.

Authors:  Thomas Knaup; Heike Korbmacher-Steiner; Anahita Jablonski-Momeni
Journal:  J Orofac Orthop       Date:  2020-09-02       Impact factor: 1.938

  9 in total

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