Literature DB >> 11745768

Standard state and thermodynamic self-consistency.

Y B Yu1.   

Abstract

It is pointed out that even though the standard state for solutions is a fictitious state, it nonetheless should be thermodynamically self-consistent. Using a volumetric constraint, it is shown that the biochemical standard state concentration of 1M is too high for macromolecules like proteins and nucleic acids that it violates volumetric self-consistency. Also, at 1 M standard state, the mole fraction of these macromolecular solutes is not the commonly held value of 1/55.5, but rather a meaningless negative number. Thus, the ideal mixing entropy (also called cratic entropy) cannot be meaningfully calculated for macromolecules at such a standard state. The relevance of this conclusion to the interpretation of standard bimolecular binding entropy is discussed. Copyright 2001 Wiley-Liss, Inc. and the American Pharmaceutical Association

Mesh:

Substances:

Year:  2001        PMID: 11745768     DOI: 10.1002/jps.1160

Source DB:  PubMed          Journal:  J Pharm Sci        ISSN: 0022-3549            Impact factor:   3.534


  1 in total

1.  Application of a BOSS-Gaussian interface for QM/MM simulations of Henry and methyl transfer reactions.

Authors:  Jonah Z Vilseck; Jakub Kostal; Julian Tirado-Rives; William L Jorgensen
Journal:  J Comput Chem       Date:  2015-08-27       Impact factor: 3.376

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.