Literature DB >> 11742691

A comprehensive study into the molecular methodology and molecular biology of methanogenic Archaea.

M Lange1, B K Ahring.   

Abstract

Methanogens belong to the kingdom of Euryarchaeota in the domain of Archaea. The Archaea differ from Bacteria in many aspects important to molecular work. Among these are cell wall composition, their sensitivity to antibiotics, their translation and transcription machinery, and their very strict demands to anaerobic culture conditions. These differences may, at least partly, be responsible for the delay in availability of genetic research tools for methanogens. At present, however, the research within genetics of methanogens and their gene regulation and expression is in rapid progress. Two complete methanogenic genomes have been sequenced and published and more are underway. Besides, sequences are known from a multitude of individual genes from methanogens. Standard methods for simple DNA and RNA work can normally be employed, but permeabilization of the cell wall may demand special procedures. Efficient genetic manipulation systems, including shuttle and integration vector systems, have appeared for mesophilic, but not for thermophilic species within the last few years and will have a major impact on future investigations of methanogenic molecular biology.

Mesh:

Year:  2001        PMID: 11742691     DOI: 10.1111/j.1574-6976.2001.tb00591.x

Source DB:  PubMed          Journal:  FEMS Microbiol Rev        ISSN: 0168-6445            Impact factor:   16.408


  13 in total

1.  Distribution, localization, and phylogeny of abundant populations of Crenarchaeota in anaerobic granular sludge.

Authors:  Gavin Collins; Leanne O'Connor; Thérèse Mahony; Armin Gieseke; Dirk de Beer; Vincent O'Flaherty
Journal:  Appl Environ Microbiol       Date:  2005-11       Impact factor: 4.792

2.  Improved and versatile transformation system allowing multiple genetic manipulations of the hyperthermophilic archaeon Thermococcus kodakaraensis.

Authors:  Takaaki Sato; Toshiaki Fukui; Haruyuki Atomi; Tadayuki Imanaka
Journal:  Appl Environ Microbiol       Date:  2005-07       Impact factor: 4.792

3.  Survival of methanogenic archaea from Siberian permafrost under simulated Martian thermal conditions.

Authors:  Daria Morozova; Diedrich Möhlmann; Dirk Wagner
Journal:  Orig Life Evol Biosph       Date:  2006-12-12       Impact factor: 1.950

4.  Microwave radiation and reactor design influence microbial communities during methane fermentation.

Authors:  Agnieszka Cydzik-Kwiatkowska; Marcin Zieliński; Paulina Jaranowska
Journal:  J Ind Microbiol Biotechnol       Date:  2012-05-22       Impact factor: 3.346

5.  Targeted gene disruption by homologous recombination in the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1.

Authors:  Takaaki Sato; Toshiaki Fukui; Haruyuki Atomi; Tadayuki Imanaka
Journal:  J Bacteriol       Date:  2003-01       Impact factor: 3.490

6.  Construction of a shuttle vector for, and spheroplast transformation of, the hyperthermophilic archaeon Pyrococcus abyssi.

Authors:  Soizick Lucas; Laurent Toffin; Yvan Zivanovic; Daniel Charlier; Hélène Moussard; Patrick Forterre; Daniel Prieur; Gaël Erauso
Journal:  Appl Environ Microbiol       Date:  2002-11       Impact factor: 4.792

7.  Metabolic characteristics of an aerobe isolated from a methylotrophic methanogenic enrichment culture.

Authors:  Stephen V Rapheal; K R Swaminathan; K Lalitha
Journal:  J Biosci       Date:  2003-03       Impact factor: 1.826

8.  Development of a markerless genetic exchange method for Methanosarcina acetivorans C2A and its use in construction of new genetic tools for methanogenic archaea.

Authors:  Matthew A Pritchett; Jun Kai Zhang; William W Metcalf
Journal:  Appl Environ Microbiol       Date:  2004-03       Impact factor: 4.792

9.  Diversity and three-dimensional structures of the alpha Mcr of the methanogenic Archaea from the anoxic region of Tucuruí Lake, in Eastern Brazilian Amazonia.

Authors:  Priscila Bessa Santana; Rubens Ghilardi Junior; Claudio Nahum Alves; Jeronimo Lameira Silva; John Anthony McCulloch; Maria Paula Cruz Schneider; Artur da Costa da Silva
Journal:  Genet Mol Biol       Date:  2012-01-20       Impact factor: 1.771

10.  Phylogenomic analysis of proteins that are distinctive of Archaea and its main subgroups and the origin of methanogenesis.

Authors:  Beile Gao; Radhey S Gupta
Journal:  BMC Genomics       Date:  2007-03-29       Impact factor: 3.969

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