Literature DB >> 11738173

Dissection of nucleophilic and acid-base catalysis in glycosidases.

D L Zechel1, S G Withers.   

Abstract

A startling array of added anions have been observed to function as replacement catalytic nucleophiles in mutant glycosidases, including formate, azide, fluoride and other halides. Likewise, the mechanism of acid-base catalysis is somewhat plastic. The carboxylic acids can be substituted by a sulfenic acid or by ascorbate, and the effective acid strength enhanced by the introduction of strong hydrogen bonds. These studies provide an interesting bridge between enzymes and models thereof.

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Year:  2001        PMID: 11738173     DOI: 10.1016/s1367-5931(01)00260-5

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  27 in total

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4.  Prospecting for microbial α-N-acetylgalactosaminidases yields a new class of GH31 O-glycanase.

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7.  N-acetylglucosaminidases from CAZy family GH3 are really glycoside phosphorylases, thereby explaining their use of histidine as an acid/base catalyst in place of glutamic acid.

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Journal:  J Biol Chem       Date:  2014-12-22       Impact factor: 5.157

8.  Diastereocontrolled electrophilic fluorinations of 2-deoxyribonolactone: syntheses of all corresponding 2-deoxy-2-fluorolactones and 2'-deoxy-2'-fluoro-NAD+s.

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Journal:  J Org Chem       Date:  2009-08-21       Impact factor: 4.354

9.  Streptococcus pneumoniae endohexosaminidase D, structural and mechanistic insight into substrate-assisted catalysis in family 85 glycoside hydrolases.

Authors:  D Wade Abbott; Matthew S Macauley; David J Vocadlo; Alisdair B Boraston
Journal:  J Biol Chem       Date:  2009-01-30       Impact factor: 5.157

10.  Mechanistic investigation of the endo-alpha-N-acetylgalactosaminidase from Streptococcus pneumoniae R6.

Authors:  Lisa M Willis; Ran Zhang; Anne Reid; Stephen G Withers; Warren W Wakarchuk
Journal:  Biochemistry       Date:  2009-11-03       Impact factor: 3.162

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