Literature DB >> 11736806

Microsatellite diversity, pedigree relatedness and the contributions of founder lineages to thoroughbred horses.

E P Cunningham1, J J Dooley, R K Splan, D G Bradley.   

Abstract

The thoroughbred (TB) horse is one of the oldest breeds of domestic animals, with pedigree records spanning three centuries. Because the population is essentially closed, there is concern about loss of genetic variation. Here we report two parallel analyses. In the first, genetic variation in the current population is measured using data from 13 microsatellite loci in 211 horses with relationships calculated based on allele sharing. In the second analysis, pedigree information is used to calculate genetic relationships between animals based on shared ancestry. These two measures of relationship are compared and shown to be closely related. Together, they provide an estimate of the amount of genetic variation which existed in founder animals. This study confirms the narrow genetic base of the breed and provides comprehensive analysis of contributions of founder animals. Seventy-eight percent of alleles in the current population are derived from 30 founders, 27 of these male. Ten founder females account for 72% of maternal lineages, while one founder stallion is responsible for 95% of paternal lineages.

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Year:  2001        PMID: 11736806     DOI: 10.1046/j.1365-2052.2001.00785.x

Source DB:  PubMed          Journal:  Anim Genet        ISSN: 0268-9146            Impact factor:   3.169


  35 in total

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Journal:  Nat Commun       Date:  2012-01-24       Impact factor: 14.919

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Journal:  Nat Commun       Date:  2011-08-23       Impact factor: 14.919

3.  Unequal contribution of sexes in the origin of dog breeds.

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4.  The American Quarter Horse: population structure and relationship to the thoroughbred.

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Authors:  Molly E McCue; Danika L Bannasch; Jessica L Petersen; Jessica Gurr; Ernie Bailey; Matthew M Binns; Ottmar Distl; Gérard Guérin; Telhisa Hasegawa; Emmeline W Hill; Tosso Leeb; Gabriella Lindgren; M Cecilia T Penedo; Knut H Røed; Oliver A Ryder; June E Swinburne; Teruaki Tozaki; Stephanie J Valberg; Mark Vaudin; Kerstin Lindblad-Toh; Claire M Wade; James R Mickelson
Journal:  PLoS Genet       Date:  2012-01-12       Impact factor: 5.917

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Authors:  Terje Raudsepp; Molly E McCue; Pranab J Das; Lauren Dobson; Monika Vishnoi; Krista L Fritz; Robert Schaefer; Aaron K Rendahl; James N Derr; Charles C Love; Dickson D Varner; Bhanu P Chowdhary
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9.  Genetic diversity in the modern horse illustrated from genome-wide SNP data.

Authors:  Jessica L Petersen; James R Mickelson; E Gus Cothran; Lisa S Andersson; Jeanette Axelsson; Ernie Bailey; Danika Bannasch; Matthew M Binns; Alexandre S Borges; Pieter Brama; Artur da Câmara Machado; Ottmar Distl; Michela Felicetti; Laura Fox-Clipsham; Kathryn T Graves; Gérard Guérin; Bianca Haase; Telhisa Hasegawa; Karin Hemmann; Emmeline W Hill; Tosso Leeb; Gabriella Lindgren; Hannes Lohi; Maria Susana Lopes; Beatrice A McGivney; Sofia Mikko; Nicholas Orr; M Cecilia T Penedo; Richard J Piercy; Marja Raekallio; Stefan Rieder; Knut H Røed; Maurizio Silvestrelli; June Swinburne; Teruaki Tozaki; Mark Vaudin; Claire M Wade; Molly E McCue
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10.  Identification of genetic variation on the horse y chromosome and the tracing of male founder lineages in modern breeds.

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Journal:  PLoS One       Date:  2013-04-03       Impact factor: 3.240

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