Literature DB >> 11736271

Coupling particles and fields in a diffusive hybrid model.

E G Flekkøy1, J Feder, G Wagner.   

Abstract

A general scheme to patch together discrete and continuous descriptions of diffusion within the same physical space is studied. In the discrete description, diffusion is described by microscopic random walkers on a lattice; in the continuous description, diffusion is described through the macroscopic diffusion equation. The coupling scheme is based on the mutual exchange of mass flux across the discrete-continuous interface. Detailed tests of the scheme, coupling particle, and field descriptions are particularly illustrative for the diffusion problem. Both the nonequilibrium transport behavior and the equilibrium fluctuations of the combined discrete-continuous system are in agreement with theoretical predictions.

Year:  2001        PMID: 11736271     DOI: 10.1103/PhysRevE.64.066302

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  10 in total

1.  Editorial: special issue on stochastic modelling of reaction-diffusion processes in biology.

Authors:  Radek Erban; Hans G Othmer
Journal:  Bull Math Biol       Date:  2014-04       Impact factor: 1.758

2.  The pseudo-compartment method for coupling partial differential equation and compartment-based models of diffusion.

Authors:  Christian A Yates; Mark B Flegg
Journal:  J R Soc Interface       Date:  2015-05-06       Impact factor: 4.118

3.  Convergence of methods for coupling of microscopic and mesoscopic reaction-diffusion simulations.

Authors:  Mark B Flegga; Stefan Hellander; Radek Erban
Journal:  J Comput Phys       Date:  2015-05-15       Impact factor: 3.553

4.  Hybrid approaches for multiple-species stochastic reaction-diffusion models.

Authors:  Fabian Spill; Pilar Guerrero; Tomas Alarcon; Philip K Maini; Helen Byrne
Journal:  J Comput Phys       Date:  2015-10-15       Impact factor: 3.553

Review 5.  On the mathematical modeling of wound healing angiogenesis in skin as a reaction-transport process.

Authors:  Jennifer A Flegg; Shakti N Menon; Philip K Maini; D L Sean McElwain
Journal:  Front Physiol       Date:  2015-09-30       Impact factor: 4.566

6.  A hybrid algorithm for coupling partial differential equation and compartment-based dynamics.

Authors:  Jonathan U Harrison; Christian A Yates
Journal:  J R Soc Interface       Date:  2016-09       Impact factor: 4.118

Review 7.  Spatially extended hybrid methods: a review.

Authors:  Cameron A Smith; Christian A Yates
Journal:  J R Soc Interface       Date:  2018-02       Impact factor: 4.118

8.  Multiscale Stochastic Reaction-Diffusion Algorithms Combining Markov Chain Models with Stochastic Partial Differential Equations.

Authors:  Hye-Won Kang; Radek Erban
Journal:  Bull Math Biol       Date:  2019-06-04       Impact factor: 1.758

9.  The auxiliary region method: a hybrid method for coupling PDE- and Brownian-based dynamics for reaction-diffusion systems.

Authors:  Cameron A Smith; Christian A Yates
Journal:  R Soc Open Sci       Date:  2018-08-01       Impact factor: 2.963

10.  The blending region hybrid framework for the simulation of stochastic reaction-diffusion processes.

Authors:  Christian A Yates; Adam George; Armand Jordana; Cameron A Smith; Andrew B Duncan; Konstantinos C Zygalakis
Journal:  J R Soc Interface       Date:  2020-10-21       Impact factor: 4.118

  10 in total

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