Literature DB >> 11729148

Phenotypic and suppressor analysis of defecation in clk-1 mutants reveals that reaction to changes in temperature is an active process in Caenorhabditis elegans.

R Branicky1, Y Shibata, J Feng, S Hekimi.   

Abstract

Mutations in the Caenorhabditis elegans maternal-effect gene clk-1 affect cellular, developmental, and behavioral timing. They result in a slowing of the cell cycle, embryonic and postembryonic development, reproduction, and aging, as well as of the defecation, swimming, and pharyngeal pumping cycles. Here, we analyze the defecation behavior in clk-1 mutants, phenotypically and genetically. When wild-type worms are grown at 20 degrees and shifted to a new temperature, the defecation cycle length is significantly affected by that new temperature. In contrast, we find that when clk-1 mutants are shifted, the defecation cycle length is unaffected by that new temperature. We carried out a screen for mutations that suppress the slow defecation phenotype at 20 degrees and identified two distinct classes of genes, which we call dsc for defecation suppressor of clk-1. Mutations in one class also restore the ability to react normally to changes in temperature, while mutations in the other class do not. Together, these results suggest that clk-1 is necessary for readjusting the defecation cycle length in response to changes in temperature. On the other hand, in the absence of clk-1 activity, we observe temperature compensation, a mechanism that maintains a constant defecation period in the face of changes in temperature.

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Year:  2001        PMID: 11729148      PMCID: PMC1461884     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  25 in total

1.  Apparent uncoupling of energy production and consumption in long-lived Clk mutants of Caenorhabditis elegans.

Authors:  B P Braeckman; K Houthoofd; A De Vreese; J R Vanfleteren
Journal:  Curr Biol       Date:  1999-05-06       Impact factor: 10.834

2.  The existence of a lysosomal redox chain and the role of ubiquinone.

Authors:  L Gille; H Nohl
Journal:  Arch Biochem Biophys       Date:  2000-03-15       Impact factor: 4.013

3.  Genetic evidence for coenzyme Q requirement in plasma membrane electron transport.

Authors:  C Santos-Ocaña; J M Villalba; F Córdoba; S Padilla; F L Crane; C F Clarke; P Navas
Journal:  J Bioenerg Biomembr       Date:  1998-10       Impact factor: 2.945

Review 4.  clk-1, mitochondria, and physiological rates.

Authors:  R Branicky; C Bénard; S Hekimi
Journal:  Bioessays       Date:  2000-01       Impact factor: 4.345

5.  Diverse behavioural defects caused by mutations in Caenorhabditis elegans unc-43 CaM kinase II.

Authors:  D J Reiner; E M Newton; H Tian; J H Thomas
Journal:  Nature       Date:  1999-11-11       Impact factor: 49.962

6.  Conservation of the Caenorhabditis elegans timing gene clk-1 from yeast to human: a gene required for ubiquinone biosynthesis with potential implications for aging.

Authors:  Z Vajo; L M King; T Jonassen; D J Wilkin; N Ho; A Munnich; C F Clarke; C A Francomano
Journal:  Mamm Genome       Date:  1999-10       Impact factor: 2.957

7.  The COQ7 gene encodes a protein in saccharomyces cerevisiae necessary for ubiquinone biosynthesis.

Authors:  B N Marbois; C F Clarke
Journal:  J Biol Chem       Date:  1996-02-09       Impact factor: 5.157

8.  Isolation and sequencing of the rat Coq7 gene and the mapping of mouse Coq7 to chromosome 7.

Authors:  T Jonassen; B N Marbois; L Kim; A Chin; Y R Xia; A J Lusis; C F Clarke
Journal:  Arch Biochem Biophys       Date:  1996-06-15       Impact factor: 4.013

9.  An ion channel of the degenerin/epithelial sodium channel superfamily controls the defecation rhythm in Caenorhabditis elegans.

Authors:  M Take-Uchi; M Kawakami; T Ishihara; T Amano; K Kondo; I Katsura
Journal:  Proc Natl Acad Sci U S A       Date:  1998-09-29       Impact factor: 11.205

10.  A ubiquinone-binding site regulates the mitochondrial permeability transition pore.

Authors:  E Fontaine; F Ichas; P Bernardi
Journal:  J Biol Chem       Date:  1998-10-02       Impact factor: 5.157

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  15 in total

1.  Uncoupling the pleiotropic phenotypes of clk-1 with tRNA missense suppressors in Caenorhabditis elegans.

Authors:  Robyn Branicky; Phuong Anh Thi Nguyen; Siegfried Hekimi
Journal:  Mol Cell Biol       Date:  2006-05       Impact factor: 4.272

2.  Deficiencies in C20 polyunsaturated fatty acids cause behavioral and developmental defects in Caenorhabditis elegans fat-3 mutants.

Authors:  Jennifer L Watts; Eric Phillips; Katharine R Griffing; John Browse
Journal:  Genetics       Date:  2003-02       Impact factor: 4.562

3.  Regulation of lipoprotein assembly, secretion and fatty acid β-oxidation by Krüppel-like transcription factor, klf-3.

Authors:  Jun Zhang; Sanya Hashmi; Fatima Cheema; Nafla Al-Nasser; Razan Bakheet; Ranjit S Parhar; Futwan Al-Mohanna; Randy Gaugler; M Mahmood Hussain; Sarwar Hashmi
Journal:  J Mol Biol       Date:  2013-04-29       Impact factor: 5.469

Review 4.  Molecular genetics of ubiquinone biosynthesis in animals.

Authors:  Ying Wang; Siegfried Hekimi
Journal:  Crit Rev Biochem Mol Biol       Date:  2012-11-29       Impact factor: 8.250

5.  The impact of mitochondrial oxidative stress on bile acid-like molecules in C. elegans provides a new perspective on human metabolic diseases.

Authors:  Ju-Ling Liu; Siegfried Hekimi
Journal:  Worm       Date:  2013-01-01

6.  Mitochondrial oxidative stress alters a pathway in Caenorhabditis elegans strongly resembling that of bile acid biosynthesis and secretion in vertebrates.

Authors:  Ju-Ling Liu; David Desjardins; Robyn Branicky; Luis B Agellon; Siegfried Hekimi
Journal:  PLoS Genet       Date:  2012-03-15       Impact factor: 5.917

Review 7.  Public and private mechanisms of life extension in Caenorhabditis elegans.

Authors:  Koen Houthoofd; Jacques R Vanfleteren
Journal:  Mol Genet Genomics       Date:  2007-03-16       Impact factor: 2.980

8.  The molecular and structural characterization of two vitellogenins from the free-living nematode Oscheius tipulae.

Authors:  Daniela P Almenara; Joselene P de Moura; Cristiane P Scarabotto; Russolina B Zingali; Carlos E Winter
Journal:  PLoS One       Date:  2013-01-07       Impact factor: 3.240

9.  Partner in fat metabolism: role of KLFs in fat burning and reproductive behavior.

Authors:  Sarwar Hashmi; Jun Zhang; Shahid S Siddiqui; Ranjit S Parhar; Razan Bakheet; Futwan Al-Mohanna
Journal:  3 Biotech       Date:  2011-07-16       Impact factor: 2.406

10.  A regulated response to impaired respiration slows behavioral rates and increases lifespan in Caenorhabditis elegans.

Authors:  David Cristina; Michael Cary; Adam Lunceford; Catherine Clarke; Cynthia Kenyon
Journal:  PLoS Genet       Date:  2009-04-10       Impact factor: 5.917

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