Literature DB >> 11729146

Isolation of X and Y chromosome-specific DNA markers from a liverwort, Marchantia polymorpha, by representational difference analysis.

M Fujisawa1, K Hayashi, T Nishio, T Bando, S Okada, K T Yamato, H Fukuzawa, K Ohyama.   

Abstract

The liverwort Marchantia polymorpha has X and Y chromosomes in the respective female and male haploids. Here we report the successful exploitation of representational difference analyses to isolate DNA markers for the sex chromosomes. Two female-specific and six male-specific DNA fragments were genetically confirmed to originate from the X and Y chromosomes, respectively.

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Year:  2001        PMID： 11729146      PMCID： PMC1461879     

Source DB:  PubMed          Journal:  Genetics        ISSN： 0016-6731            Impact factor:   4.562


  19 in total

1.  Systematic screening of yeast artificial-chromosome libraries by use of the polymerase chain reaction.

Authors:  E D Green; M V Olson
Journal:  Proc Natl Acad Sci U S A       Date:  1990-02       Impact factor: 11.205

2.  Genomic subtraction for cloning DNA corresponding to deletion mutations.

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6.  Additional locus of rDNA sequence specific to the X chromosome of the liverwort, Marchantia polymorpha.

Authors:  S Nakayama; M Fujishita; T Sone; K Ohyama
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7.  Cloning the differences between two complex genomes.

Authors:  N Lisitsyn; N Lisitsyn; M Wigler
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8.  The Y chromosome in the liverwort Marchantia polymorpha has accumulated unique repeat sequences harboring a male-specific gene.

Authors:  S Okada; T Sone; M Fujisawa; S Nakayama; M Takenaka; K Ishizaki; K Kono; Y Shimizu-Ueda; T Hanajiri; K T Yamato; H Fukuzawa; A Brennicke; K Ohyama
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-31       Impact factor: 11.205

9.  Isolation and characterization of X chromosome-derived DNA sequences from a dioecious plant Melandrium album.

Authors:  J Bůzek; H Koutníková; A Houben; K Ríha; B Janousek; J Siroký; S Grant; B Vyskot
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10.  Chromosome painting of Y chromosomes and isolation of a Y chromosome-specific repetitive sequence in the dioecious plant Rumex acetosa.

Authors:  F Shibata; M Hizume; Y Kuroki
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  12 in total

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3.  Isolation and characterization of delta(6)-desaturase, an ELO-like enzyme and delta(5)-desaturase from the liverwort Marchantia polymorpha and production of arachidonic and eicosapentaenoic acids in the methylotrophic yeast Pichia pastoris.

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4.  Gene organization of the liverwort Y chromosome reveals distinct sex chromosome evolution in a haploid system.

Authors:  Katsuyuki T Yamato; Kimitsune Ishizaki; Masaki Fujisawa; Sachiko Okada; Shigeki Nakayama; Mariko Fujishita; Hiroki Bando; Kohei Yodoya; Kiwako Hayashi; Tomoyuki Bando; Akiko Hasumi; Tomohisa Nishio; Ryoko Sakata; Masayuki Yamamoto; Arata Yamaki; Masataka Kajikawa; Takashi Yamano; Taku Nishide; Seung-Hyuk Choi; Yuu Shimizu-Ueda; Tsutomu Hanajiri; Megumi Sakaida; Kaoru Kono; Mizuki Takenaka; Shohei Yamaoka; Chiaki Kuriyama; Yoshito Kohzu; Hiroyuki Nishida; Axel Brennicke; Tadasu Shin-i; Yuji Kohara; Takayuki Kohchi; Hideya Fukuzawa; Kanji Ohyama
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5.  Direct transformation of the liverwort Marchantia polymorpha L. by particle bombardment using immature thalli developing from spores.

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7.  RNA sequencing analysis of the gametophyte transcriptome from the liverwort, Marchantia polymorpha.

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Review 8.  Gene content, organization and molecular evolution of plant organellar genomes and sex chromosomes: insights from the case of the liverwort Marchantia polymorpha.

Authors:  Kanji Ohyama; Miho Takemura; Kenji Oda; Hideya Fukuzawa; Takayuki Kohchi; Sigeki Nakayama; Kimitsune Ishizaki; Masaki Fujisawa; Katsuyuki Yamato
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9.  Evolution of ribosomal DNA unit on the X chromosome independent of autosomal units in the liverwort Marchantia polymorpha.

Authors:  Masaki Fujisawa; Shigeki Nakayama; Tomohisa Nishio; Mariko Fujishita; Kiwako Hayashi; Kimitsune Ishizaki; Masataka Kajikawa; Katsuyuki T Yamato; Hideya Fukuzawa; Kanji Ohyama
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10.  A cis-acting bidirectional transcription switch controls sexual dimorphism in the liverwort.

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Journal:  EMBO J       Date:  2019-01-04       Impact factor: 11.598
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