Literature DB >> 11727564

The conserved characteristics of DNA-binding domains belonging to the homeodomain class that are associated with coadaptive substitutions of amino acid residues.

D A Afonnikov1, N A Koichanov.   

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Year:  2001        PMID: 11727564     DOI: 10.1023/a:1012304628844

Source DB:  PubMed          Journal:  Dokl Biochem Biophys        ISSN: 1607-6729            Impact factor:   0.788


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  10 in total

1.  Crystal structure of an engrailed homeodomain-DNA complex at 2.8 A resolution: a framework for understanding homeodomain-DNA interactions.

Authors:  C R Kissinger; B S Liu; E Martin-Blanco; T B Kornberg; C O Pabo
Journal:  Cell       Date:  1990-11-02       Impact factor: 41.582

2.  Pfam: multiple sequence alignments and HMM-profiles of protein domains.

Authors:  E L Sonnhammer; S R Eddy; E Birney; A Bateman; R Durbin
Journal:  Nucleic Acids Res       Date:  1998-01-01       Impact factor: 16.971

3.  [Detection of correlating DNA-binding positions in CREB and AP-1 family transcription factors].

Authors:  D A Afonnikov; Iu V Kondrakhin; I I Titov
Journal:  Mol Biol (Mosk)       Date:  1997 Jul-Aug

4.  [Classification of eukaryotic transcription factors].

Authors:  E Wingender
Journal:  Mol Biol (Mosk)       Date:  1997 Jul-Aug

5.  Can three-dimensional contacts in protein structures be predicted by analysis of correlated mutations?

Authors:  I N Shindyalov; N A Kolchanov; C Sander
Journal:  Protein Eng       Date:  1994-03

6.  Covariation of residues in the homeodomain sequence family.

Authors:  N D Clarke
Journal:  Protein Sci       Date:  1995-11       Impact factor: 6.725

7.  Volume changes in protein evolution.

Authors:  M Gerstein; E L Sonnhammer; C Chothia
Journal:  J Mol Biol       Date:  1994-03-04       Impact factor: 5.469

8.  CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.

Authors:  J D Thompson; D G Higgins; T J Gibson
Journal:  Nucleic Acids Res       Date:  1994-11-11       Impact factor: 16.971

9.  Ion-pairs in proteins.

Authors:  D J Barlow; J M Thornton
Journal:  J Mol Biol       Date:  1983-08-25       Impact factor: 5.469

10.  The relation between the divergence of sequence and structure in proteins.

Authors:  C Chothia; A M Lesk
Journal:  EMBO J       Date:  1986-04       Impact factor: 11.598

  10 in total

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