Literature DB >> 11722759

The mobility of the tobacco Tnt1 retrotransposon correlates with its transcriptional activation by fungal factors.

D Melayah1, E Bonnivard, B Chalhoub, C Audeon, M A Grandbastien.   

Abstract

We have analyzed the stress-induced amplification of the tobacco Tnt1 element, one of the rare active plant retrotransposons. Tnt1 mobility was monitored using the retrotransposon-anchored SSAP strategy that allows the screening of multiple insertion sites of high copy number elements. We have screened for Tnt1 insertion polymorphisms in plants regenerated from mesophyll leaf cells, either via explant culture or via protoplast isolation. The second procedure includes an overnight exposure to fungal extracts known to induce high levels of Tnt1 transcription. Newly transposed Tnt1 copies were detected in nearly 25% of the plants regenerated via protoplast isolation, and in less than 3% of the plants derived from explant culture. These results show that Tnt1 transcription is followed by transposition, and that fungal extracts efficiently activate Tnt1 mobility. Transcription appears to be the key step to controlling Tnt1 amplification, as newly transposed Tnt1 copies show high sequence similarities to the subpopulations of transcribed Tnt1 elements. Our results provide direct evidence that factors of microbial origin are able to induce retrotransposon amplification in plants, and strengthen the hypothesis that stress modulation of transposable elements might play a role in generating host genetic plasticity in response to environmental stresses.

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Year:  2001        PMID: 11722759     DOI: 10.1046/j.1365-313x.2001.01141.x

Source DB:  PubMed          Journal:  Plant J        ISSN: 0960-7412            Impact factor:   6.417


  34 in total

1.  Inhibition of SAH-hydrolase activity during seed germination leads to deregulation of flowering genes and altered flower morphology in tobacco.

Authors:  Jaroslav Fulneček; Roman Matyášek; Ivan Votruba; Antonín Holý; Kateřina Křížová; Aleš Kovařík
Journal:  Mol Genet Genomics       Date:  2011-01-28       Impact factor: 3.291

2.  Genomic characterization of Rim2/Hipa elements reveals a CACTA-like transposon superfamily with unique features in the rice genome.

Authors:  G-D Wang; P-F Tian; Z-K Cheng; G Wu; J-M Jiang; D-B Li; Q Li; Z-H He
Journal:  Mol Genet Genomics       Date:  2003-09-26       Impact factor: 3.291

3.  Two-step regulation and continuous retrotransposition of the rice LINE-type retrotransposon Karma.

Authors:  Mai Komatsu; Ko Shimamoto; Junko Kyozuka
Journal:  Plant Cell       Date:  2003-08       Impact factor: 11.277

Review 4.  The effect of stress on genome regulation and structure.

Authors:  Andreas Madlung; Luca Comai
Journal:  Ann Bot       Date:  2004-08-19       Impact factor: 4.357

5.  Comparative analyses of genetic diversities within tomato and pepper collections detected by retrotransposon-based SSAP, AFLP and SSR.

Authors:  Sheh May Tam; Corinne Mhiri; Aat Vogelaar; Marcel Kerkveld; Stephen R Pearce; Marie-Angèle Grandbastien
Journal:  Theor Appl Genet       Date:  2005-02-08       Impact factor: 5.699

6.  Isolation of an active element from a high-copy-number family of retrotransposons in the sweetpotato genome.

Authors:  M Tahara; T Aoki; S Suzuka; H Yamashita; M Tanaka; S Matsunaga; S Kokumai
Journal:  Mol Genet Genomics       Date:  2004-07-28       Impact factor: 3.291

Review 7.  Applying mobile genetic elements for genome analysis and evolution.

Authors:  Wolfgang J Miller; Pierre Capy
Journal:  Mol Biotechnol       Date:  2006-06       Impact factor: 2.695

8.  Reme1, a Copia retrotransposon in melon, is transcriptionally induced by UV light.

Authors:  Elisenda Ramallo; Ruslan Kalendar; Alan H Schulman; José A Martínez-Izquierdo
Journal:  Plant Mol Biol       Date:  2007-11-22       Impact factor: 4.076

9.  Distribution dynamics of the Tnt1 retrotransposon in tobacco.

Authors:  Quang Hien Le; Delphine Melayah; Eric Bonnivard; Maud Petit; Marie-Angèle Grandbastien
Journal:  Mol Genet Genomics       Date:  2007-09-01       Impact factor: 3.291

10.  Replication of nonautonomous retroelements in soybean appears to be both recent and common.

Authors:  Adam Wawrzynski; Tom Ashfield; Nicolas W G Chen; Jafar Mammadov; Ashley Nguyen; Ram Podicheti; Steven B Cannon; Vincent Thareau; Carine Ameline-Torregrosa; Ethalinda Cannon; Ben Chacko; Arnaud Couloux; Anita Dalwani; Roxanne Denny; Shweta Deshpande; Ashley N Egan; Natasha Glover; Stacy Howell; Dan Ilut; Hongshing Lai; Sara Martin Del Campo; Michelle Metcalf; Majesta O'Bleness; Bernard E Pfeil; Milind B Ratnaparkhe; Sylvie Samain; Iryna Sanders; Béatrice Ségurens; Mireille Sévignac; Sue Sherman-Broyles; Dominic M Tucker; Jing Yi; Jeff J Doyle; Valérie Geffroy; Bruce A Roe; M A Saghai Maroof; Nevin D Young; Roger W Innes
Journal:  Plant Physiol       Date:  2008-10-24       Impact factor: 8.340

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