Literature DB >> 11718948

Controlling the higher-order structure of giant DNA molecules.

K Yoshikawa1.   

Abstract

Giant DNA molecules of size greater than several kbp adopt an elongated coil conformation in aqueous solution. On addition of various kinds of condensing agents, the giant DNA molecules fold into a compact state. With multivalent cations, individual DNA molecules show large discrete transitions between the elongated and compact states. Similarly, with the addition of polymers such as PEG, DNA molecules also switch conformation in an all-or-none manner. In contrast, DNAs fold into a loose compact state with cationic surfactants. The experimental conditions necessary to generate stable soluble particles from single DNA molecules and also to obtain multiple DNA molecular assemblies are outlined. The relationship between the higher-order structure and the efficiency of gene transfection is discussed.

Entities:  

Mesh:

Substances:

Year:  2001        PMID: 11718948     DOI: 10.1016/s0169-409x(01)00210-1

Source DB:  PubMed          Journal:  Adv Drug Deliv Rev        ISSN: 0169-409X            Impact factor:   15.470


  10 in total

1.  The role of a microscopic colloidally stabilized phase in solubilizing oligoamine-condensed DNA complexes.

Authors:  Vladimir S Trubetskoy; Jon A Wolff; Vladimir G Budker
Journal:  Biophys J       Date:  2003-02       Impact factor: 4.033

2.  Fluorescence dynamics of DNA condensed by the molecular crowding agent poly(ethylene glycol).

Authors:  Mamata H Kombrabail; G Krishnamoorthy
Journal:  J Fluoresc       Date:  2005-09       Impact factor: 2.217

3.  Theoretical studies of the conformational behavior of chain molecules containing polar groups: simulations of a poly(vinylidene fluoride) model.

Authors:  Yong Chen; Chwen-Yang Shew
Journal:  J Mol Model       Date:  2003-09-27       Impact factor: 1.810

4.  ON-OFF switching of transcriptional activity of large DNA through a conformational transition in cooperation with phospholipid membrane.

Authors:  Akihiko Tsuji; Kenichi Yoshikawa
Journal:  J Am Chem Soc       Date:  2010-09-08       Impact factor: 15.419

5.  Conformational transition of giant DNA in a confined space surrounded by a phospholipid membrane.

Authors:  Ayako Kato; Eri Shindo; Takahiro Sakaue; Akihiko Tsuji; Kenichi Yoshikawa
Journal:  Biophys J       Date:  2009-09-16       Impact factor: 4.033

Review 6.  Nonspecific characteristics of macromolecules create specific effects in living cells.

Authors:  Kanta Tsumoto; Hiroki Sakuta; Kingo Takiguchi; Kenichi Yoshikawa
Journal:  Biophys Rev       Date:  2020-03-06

7.  Single-molecule compaction of megabase-long chromatin molecules by multivalent cations.

Authors:  Anatoly Zinchenko; Nikolay V Berezhnoy; Sai Wang; William M Rosencrans; Nikolay Korolev; Johan R C van der Maarel; Lars Nordenskiöld
Journal:  Nucleic Acids Res       Date:  2018-01-25       Impact factor: 16.971

8.  Role of metallic core for the stability of virus-like particles in strongly coupled electrostatics.

Authors:  Leili Javidpour; Anže Lošdorfer Božič; Rudolf Podgornik; Ali Naji
Journal:  Sci Rep       Date:  2019-03-07       Impact factor: 4.379

9.  Consistent ultra-long DNA sequencing with automated slow pipetting.

Authors:  Trent M Prall; Emma K Neumann; Julie A Karl; Cecilia G Shortreed; David A Baker; Hailey E Bussan; Roger W Wiseman; David H O'Connor
Journal:  BMC Genomics       Date:  2021-03-12       Impact factor: 3.969

10.  Global genetic response in a cancer cell: self-organized coherent expression dynamics.

Authors:  Masa Tsuchiya; Midori Hashimoto; Yoshiko Takenaka; Ikuko N Motoike; Kenichi Yoshikawa
Journal:  PLoS One       Date:  2014-05-15       Impact factor: 3.240

  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.