Literature DB >> 11710981

Clock-associated genes in Arabidopsis: a family affair.

D E Somers1.   

Abstract

The identification of components of the plant circadian clock has been advanced recently with the success of two forward genetics approaches. The ZEITLUPE and TOC1 loci were cloned and each was found to be part of two separate, larger gene families with intriguing domain structures. The ZTL family of proteins contains a subclass of the PAS domain coupled to an F box and kelch motifs, suggesting that they play a role in a novel light-regulated ubiquitination mechanism. TOC1 shares similarity to the receiver domain of the well-known two-component phosphorelay signalling systems, combined with a strong similarity to a region of the CONSTANS transcription factor, which is involved in controlling flowering time. When added to the repertoire of previously identified clock-associated genes, it is clear that both similarities and differences with other circadian systems will emerge in the coming years.

Entities:  

Mesh:

Substances:

Year:  2001        PMID: 11710981      PMCID: PMC1088550          DOI: 10.1098/rstb.2001.0965

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  49 in total

1.  A role for the proteasome in the light response of the timeless clock protein.

Authors:  N Naidoo; W Song; M Hunter-Ensor; A Sehgal
Journal:  Science       Date:  1999-09-10       Impact factor: 47.728

Review 2.  Remembrance of things PAS: regulation of development by bHLH-PAS proteins.

Authors:  S T Crews; C M Fan
Journal:  Curr Opin Genet Dev       Date:  1999-10       Impact factor: 5.578

3.  The late elongated hypocotyl mutation of Arabidopsis disrupts circadian rhythms and the photoperiodic control of flowering.

Authors:  R Schaffer; N Ramsay; A Samach; S Corden; J Putterill; I A Carré; G Coupland
Journal:  Cell       Date:  1998-06-26       Impact factor: 41.582

4.  Photoactive yellow protein: a structural prototype for the three-dimensional fold of the PAS domain superfamily.

Authors:  J L Pellequer; K A Wager-Smith; S A Kay; E D Getzoff
Journal:  Proc Natl Acad Sci U S A       Date:  1998-05-26       Impact factor: 11.205

5.  Protein kinase CK2 interacts with and phosphorylates the Arabidopsis circadian clock-associated 1 protein.

Authors:  S Sugano; C Andronis; R M Green; Z Y Wang; E M Tobin
Journal:  Proc Natl Acad Sci U S A       Date:  1998-09-01       Impact factor: 11.205

6.  Roles in dimerization and blue light photoresponse of the PAS and LOV domains of Neurospora crassa white collar proteins.

Authors:  P Ballario; C Talora; D Galli; H Linden; G Macino
Journal:  Mol Microbiol       Date:  1998-08       Impact factor: 3.501

7.  Phytochromes and cryptochromes in the entrainment of the Arabidopsis circadian clock.

Authors:  D E Somers; P F Devlin; S A Kay
Journal:  Science       Date:  1998-11-20       Impact factor: 47.728

8.  Constitutive expression of the CIRCADIAN CLOCK ASSOCIATED 1 (CCA1) gene disrupts circadian rhythms and suppresses its own expression.

Authors:  Z Y Wang; E M Tobin
Journal:  Cell       Date:  1998-06-26       Impact factor: 41.582

9.  Conserved structure and function of the Arabidopsis flowering time gene CONSTANS in Brassica napus.

Authors:  L S Robert; F Robson; A Sharpe; D Lydiate; G Coupland
Journal:  Plant Mol Biol       Date:  1998-07       Impact factor: 4.076

10.  The short-period mutant, toc1-1, alters circadian clock regulation of multiple outputs throughout development in Arabidopsis thaliana.

Authors:  D E Somers; A A Webb; M Pearson; S A Kay
Journal:  Development       Date:  1998-02       Impact factor: 6.868

View more
  11 in total

1.  The F-box protein ZEITLUPE confers dosage-dependent control on the circadian clock, photomorphogenesis, and flowering time.

Authors:  David E Somers; Woe-Yeon Kim; Ruishuang Geng
Journal:  Plant Cell       Date:  2004-02-18       Impact factor: 11.277

2.  Independent roles for EARLY FLOWERING 3 and ZEITLUPE in the control of circadian timing, hypocotyl length, and flowering time.

Authors:  Woe-Yeon Kim; Karen A Hicks; David E Somers
Journal:  Plant Physiol       Date:  2005-10-28       Impact factor: 8.340

3.  14-3-3 proteins, red light and photoperiodic flowering: A point of connection?

Authors:  Anna-Lisa Paul; Kevin M Folta; Robert J Ferl
Journal:  Plant Signal Behav       Date:  2008-08

Review 4.  Flowering in time: genes controlling photoperiodic flowering in Arabidopsis.

Authors:  J Putterill
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2001-11-29       Impact factor: 6.237

Review 5.  Picking out parallels: plant circadian clocks in context.

Authors:  H G McWatters; L C Roden; D Staiger
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2001-11-29       Impact factor: 6.237

6.  Quantitative Circadian Phosphoproteomic Analysis of Arabidopsis Reveals Extensive Clock Control of Key Components in Physiological, Metabolic, and Signaling Pathways.

Authors:  Mani Kant Choudhary; Yuko Nomura; Lei Wang; Hirofumi Nakagami; David E Somers
Journal:  Mol Cell Proteomics       Date:  2015-06-19       Impact factor: 5.911

7.  Circadian and diurnal calcium oscillations encode photoperiodic information in Arabidopsis.

Authors:  John Love; Antony N Dodd; Alex A R Webb
Journal:  Plant Cell       Date:  2004-03-18       Impact factor: 11.277

8.  Molecular phylogeny of the kelch-repeat superfamily reveals an expansion of BTB/kelch proteins in animals.

Authors:  Soren Prag; Josephine C Adams
Journal:  BMC Bioinformatics       Date:  2003-09-17       Impact factor: 3.169

9.  Quantitative inference of dynamic regulatory pathways via microarray data.

Authors:  Wen-Chieh Chang; Chang-Wei Li; Bor-Sen Chen
Journal:  BMC Bioinformatics       Date:  2005-03-07       Impact factor: 3.169

10.  Using light to improve commercial value.

Authors:  Matthew Alan Jones
Journal:  Hortic Res       Date:  2018-09-01       Impact factor: 6.793

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.