Literature DB >> 11710564

Binding citrate/DNA in presence of divalent cations. Potential mimicry of acidic peptides/DNA interactions.

I Calzuola1, G L Gianfranceschi, V Marsili.   

Abstract

Citric acid whose structure is comparable to that of small acidic peptides, can bind to DNA in the presence of divalent cations (Cu2+, Fe2+, Zn2+, Mg2+). Citrate-DNA interaction occurs also in a cell homogenate and in this experimental model too requires the presence of natural divalent cations. In fact the addition of 2 mM EDTA to cell homogenate strongly decreases the DNA-citrate binding. The results demonstrate that divalent cations can act as bridges between two acidic molecules and that citric acid can mimic the structure of acidic peptides.

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Year:  2001        PMID: 11710564     DOI: 10.1023/a:1011903932645

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  15 in total

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Journal:  Mol Biol Rep       Date:  1999-12       Impact factor: 2.316

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Authors:  V Marsili; L Mancinelli; I Calzuola; G L Gianfranceschi
Journal:  Riv Biol       Date:  2000 Jan-Apr

3.  Phosphorylation of the synthetic octapeptide pyroGlu-ASP-ASP-SER-ASP-GLU-GLU-ASN and binding to DNA in presence of divalent cations.

Authors:  E Cardellini; D Ponti; G L Gianfranceschi
Journal:  Mol Biol Rep       Date:  1999-12       Impact factor: 2.316

4.  STAT3 forms stable homodimers in the presence of divalent cations prior to activation.

Authors:  U Novak; H Ji; V Kanagasundaram; R Simpson; L Paradiso
Journal:  Biochem Biophys Res Commun       Date:  1998-06-29       Impact factor: 3.575

5.  Bacillus subtilis 168 RecR protein-DNA complexes visualized as looped structures.

Authors:  S Ayora; A C Stiege; R Lurz; J C Alonso
Journal:  Mol Gen Genet       Date:  1997-03-18

6.  Structural organization of procaryotic and eucaryotic Hsp90. Influence of divalent cations on structure and function.

Authors:  U Jakob; I Meyer; H Bügl; S André; J C Bardwell; J Buchner
Journal:  J Biol Chem       Date:  1995-06-16       Impact factor: 5.157

7.  suGF1 binds in the major groove of its oligo(dG).oligo(dC) recognition sequence and is excluded by a positioned nucleosome core.

Authors:  D Patterton; J Hapgood
Journal:  Mol Cell Biol       Date:  1994-02       Impact factor: 4.272

8.  Unwinding of DNA by nonhistone protein HMG1 and HMG2.

Authors:  M Yoshida; K Makiguchi; Y Chida; K Shimura
Journal:  Nucleic Acids Symp Ser       Date:  1984

9.  Molecular models of acidic peptides from pea bud chromatin and seminal plasma. Divalent cations-mediated interaction with DNA.

Authors:  L Mancinelli; F Chillemi; E Cardellini; V Marsili; F Giavarini; L De Angelis; G Lugaro; G L Gianfranceschi
Journal:  Biol Chem       Date:  1999-01       Impact factor: 3.915

10.  Small peptides controlling transcription in vitro are bound to chromatin DNA.

Authors:  G L Gianfranceschi; D Barra; F Bossa; S Coderoni; M Paparelli; F Venanzi; F Cicconi; D Amici
Journal:  Biochim Biophys Acta       Date:  1982-11-30
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2.  Competition between citrate and heptapeptide DDSDEEN binding to DNA in presence of divalent cations.

Authors:  I Calzuola; E Castigli; G L Gianfranceschi; V Marsili
Journal:  Mol Biol Rep       Date:  2001-03       Impact factor: 2.316

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Journal:  Methods Mol Biol       Date:  2013

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  4 in total

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