Literature DB >> 11681938

Can we predict the conformational preference of amides?

M Avalos1, R Babiano, J L Barneto, J L Bravo, P Cintas, J L Jiménez, J C Palacios.   

Abstract

To what extent, if any, is the conformation of secondary amides revealed by theory? This question has now been addressed by computational methods using calculations at the B3LYP/6-31G level of theory and (1)H NMR spectroscopy. Both gas-phase and solvent studies predict a Z-anti conformation to be the lowest in energy for an evaluated series of acetamides. Moreover, Z-anti conformations may also be inferred from the chemical shifts of the N-CH alpha protons determined by NMR spectroscopy. Thus, a proton situated anti to the N-H proton consistently appears approximately 0.8 ppm further downfield than a proton situated gauche to the N-H proton. This finding, which could only be derived by using the DFT calculations of conformational preference as a guide to interpret the NMR data, might prove to be useful as a simple and convenient methodology for establishing amide conformation experimentally.

Entities:  

Year:  2001        PMID: 11681938     DOI: 10.1021/jo0102361

Source DB:  PubMed          Journal:  J Org Chem        ISSN: 0022-3263            Impact factor:   4.354


  2 in total

1.  Probing helix propensity of monomers within a helical oligomer.

Authors:  Christel Dolain; Jean-Michel Léger; Nicolas Delsuc; Heinz Gornitzka; Ivan Huc
Journal:  Proc Natl Acad Sci U S A       Date:  2005-10-28       Impact factor: 11.205

2.  Structure-Based Design of a Macrocyclic PROTAC.

Authors:  Andrea Testa; Scott J Hughes; Xavier Lucas; Jane E Wright; Alessio Ciulli
Journal:  Angew Chem Int Ed Engl       Date:  2019-12-12       Impact factor: 15.336

  2 in total

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