Literature DB >> 11675588

Molecular mimicry between protein and tRNA.

Y Nakamura1.   

Abstract

Mimicry is a sophisticated development in animals, fish, and plants that allows them to fool others by imitating a shape or color for diverse purposes, such as to prey, evade, lure, pollinate, or threaten. This is not restricted to the macro-world, but extends to the micro-world as molecular mimicry. Recent advances in structural and molecular biology uncovered a set of translation factors that resembles a tRNA shape and, in one case, even mimics a tRNA function for deciphering the genetic code. Nature must have evolved this art of molecular mimicry between protein and ribonucleic acid by using different protein structures until the translation factors sat in the cockpit of a ribosome machine, on behalf of tRNA, and achieved diverse actions. Structural, functional, and evolutionary aspects of molecular mimicry will be discussed.

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Year:  2001        PMID: 11675588     DOI: 10.1007/s002390010218

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  6 in total

1.  Molecular mimicry: quantitative methods to study structural similarity between protein and RNA.

Authors:  Han Liang; Laura F Landweber
Journal:  RNA       Date:  2005-08       Impact factor: 4.942

2.  Structural and molecular basis for hyperspecificity of RNA aptamer to human immunoglobulin G.

Authors:  Shin Miyakawa; Yusuke Nomura; Taiichi Sakamoto; Yoshiki Yamaguchi; Koichi Kato; Satoko Yamazaki; Yoshikazu Nakamura
Journal:  RNA       Date:  2008-04-25       Impact factor: 4.942

3.  Assessing functional divergence in EF-1alpha and its paralogs in eukaryotes and archaebacteria.

Authors:  Yuji Inagaki; Christian Blouin; Edward Susko; Andrew J Roger
Journal:  Nucleic Acids Res       Date:  2003-07-15       Impact factor: 16.971

4.  The conserved GTPase HflX is a ribosome splitting factor that binds to the E-site of the bacterial ribosome.

Authors:  Mackenzie L Coatham; Harland E Brandon; Jeffrey J Fischer; Tobias Schümmer; Hans-Joachim Wieden
Journal:  Nucleic Acids Res       Date:  2016-01-04       Impact factor: 16.971

5.  Conformational plasticity of RNA for target recognition as revealed by the 2.15 A crystal structure of a human IgG-aptamer complex.

Authors:  Yusuke Nomura; Shigeru Sugiyama; Taiichi Sakamoto; Shin Miyakawa; Hiroaki Adachi; Kazufumi Takano; Satoshi Murakami; Tsuyoshi Inoue; Yusuke Mori; Yoshikazu Nakamura; Hiroyoshi Matsumura
Journal:  Nucleic Acids Res       Date:  2010-07-30       Impact factor: 16.971

6.  Brownian dynamics study of the association between the 70S ribosome and elongation factor G.

Authors:  Maciej Długosz; Gary A Huber; J Andrew McCammon; Joanna Trylska
Journal:  Biopolymers       Date:  2011-03-10       Impact factor: 2.505

  6 in total

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