Literature DB >> 11674219

C-3'-Branched Thymidines as Precursors for the Selective Generation of C-3'-Nucleoside Radicals.

Steffi Körner1, Amanda Bryant-Friedrich, Bernd Giese.   

Abstract

C-3'-nucleoside radicals can be generated via Norrish type I photocleavage of C-3'-acyl nucleoside derivatives. In monomer experiments employing C-3'-acylthymidine derivatives 2 and 3, a 1:1 mixture of isomers of the H-abstraction products was obtained when the photolysis was carried out in the presence of a hydrogen donor. Derivatives 2 were synthesized by an approach which involves the formation of a silyl-protected cyanohydrin, which is subsequently alkylated with organolithium reagents, followed by hydrolysis. Derivatives 3 could be obtained via a multistep synthesis starting from diol 7. Several different methods were attempted to oxidize the unprotected diol to the alpha-hydroxy aldehyde. Finally, a route was chosen which involves a protection-deprotection sequence followed by oxidation of the free primary alcohol. The resulting modified nucleosides should facilitate the study of C-3'-DNA radicals.

Entities:  

Year:  1999        PMID: 11674219     DOI: 10.1021/jo982022y

Source DB:  PubMed          Journal:  J Org Chem        ISSN: 0022-3263            Impact factor:   4.354


  6 in total

1.  Mechanism of Rate Acceleration of Radical C-C Bond Formation Reaction by a Radical SAM GTP 3',8-Cyclase.

Authors:  Haoran Pang; Edward A Lilla; Pan Zhang; Du Zhang; Thomas P Shields; Lincoln G Scott; Weitao Yang; Kenichi Yokoyama
Journal:  J Am Chem Soc       Date:  2020-05-11       Impact factor: 15.419

2.  Cytotoxic and Mutagenic Properties of C3'-Epimeric Lesions of 2'-Deoxyribonucleosides in Escherichia coli Cells.

Authors:  Pengcheng Wang; Nicholas J Amato; Yinsheng Wang
Journal:  Biochemistry       Date:  2017-07-10       Impact factor: 3.162

3.  Direct strand scission in double stranded RNA via a C5-pyrimidine radical.

Authors:  Marino J E Resendiz; Venkata Pottiboyina; Michael D Sevilla; Marc M Greenberg
Journal:  J Am Chem Soc       Date:  2012-02-15       Impact factor: 15.419

4.  Generation of 5-(2'-deoxycytidyl)methyl radical and the formation of intrastrand cross-link lesions in oligodeoxyribonucleotides.

Authors:  Qibin Zhang; Yinsheng Wang
Journal:  Nucleic Acids Res       Date:  2005-03-14       Impact factor: 16.971

5.  Independent generation and reactivity of uridin-2'-yl radical.

Authors:  Rakesh Paul; Marc M Greenberg
Journal:  J Org Chem       Date:  2014-10-17       Impact factor: 4.354

Review 6.  Epimeric 2-deoxyribose lesions: Products from the improper chemical repair of 2-deoxyribose radicals.

Authors:  Nicholas J Amato; Yinsheng Wang
Journal:  Chem Res Toxicol       Date:  2014-02-17       Impact factor: 3.739

  6 in total

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