Literature DB >> 11673403

Sequence variation and disease in the wake of the draft human genome.

L Goodstadt1, C P Ponting.   

Abstract

The sequencing phase of the human genome project will soon be over. In its wake, repertoires of sequence polymorphisms among the human population are being sampled and a battery of functional genomics projects, from gene and protein expression studies to whole proteome interaction experiments, are generating vast quantities of data. Now that the data, or the means to generate data, are available it is the application of this information in enhancing our understanding of biology that represents the next formidable challenge. Two prominent issues should be considered. First, existing data must be analysed using the best methods available. The prediction of enzymatic activity for bestrophin, whose gene is mutated in Best macular dystrophy, is described in this review. This is an example of the experimentally testable hypotheses that can result from such detailed and exhaustive analyses. Secondly, the torrents of data from high-throughput studies will need to be made more accessible to all using web-based resources that integrate and digest complementary data types. The internet sites that showcase the human genome sequence are blazing a new trail. Ultimately, the success of genome sequencing and functional genomics will be measured not by the quantity and accuracy of raw data generated, but how rapidly they can be harnessed to span the divide between genotype and phenotype.

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Year:  2001        PMID: 11673403     DOI: 10.1093/hmg/10.20.2209

Source DB:  PubMed          Journal:  Hum Mol Genet        ISSN: 0964-6906            Impact factor:   6.150


  6 in total

1.  LS-SNP/PDB: annotated non-synonymous SNPs mapped to Protein Data Bank structures.

Authors:  Michael Ryan; Mark Diekhans; Stephanie Lien; Yun Liu; Rachel Karchin
Journal:  Bioinformatics       Date:  2009-04-15       Impact factor: 6.937

2.  Recent improvements to the SMART domain-based sequence annotation resource.

Authors:  Ivica Letunic; Leo Goodstadt; Nicholas J Dickens; Tobias Doerks; Joerg Schultz; Richard Mott; Francesca Ciccarelli; Richard R Copley; Chris P Ponting; Peer Bork
Journal:  Nucleic Acids Res       Date:  2002-01-01       Impact factor: 16.971

Review 3.  Child and adolescent psychiatric genetics.

Authors:  Johannes Hebebrand; Andre Scherag; Benno G Schimmelmann; Anke Hinney
Journal:  Eur Child Adolesc Psychiatry       Date:  2010-02-06       Impact factor: 4.785

Review 4.  Microarrays: new tools for transplantation research.

Authors:  Mei-Sze Chua; Minnie M Sarwal
Journal:  Pediatr Nephrol       Date:  2003-03-18       Impact factor: 3.714

5.  Neuronal signaling modulates protein homeostasis in Caenorhabditis elegans post-synaptic muscle cells.

Authors:  Susana M Garcia; M Olivia Casanueva; M Catarina Silva; Margarida D Amaral; Richard I Morimoto
Journal:  Genes Dev       Date:  2007-11-15       Impact factor: 11.361

6.  TM6SF2 and MAC30, new enzyme homologs in sterol metabolism and common metabolic disease.

Authors:  Luis Sanchez-Pulido; Chris P Ponting
Journal:  Front Genet       Date:  2014-12-11       Impact factor: 4.599

  6 in total

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