Literature DB >> 11671184

Structure and Bonding of Diiodine Adducts of the Sulfur-Rich Donors 1,3-Dithiacyclohexane-2-thione (ptc) and 4,5-Ethylenedithio-1,3-dithiole-2-thione (ttb).

Francesco Bigoli1, Paola Deplano, Andrea Ienco, Carlo Mealli, Maria Laura Mercuri, Maria Angela Pellinghelli, Gloria Pintus, Giuseppe Saba, Emanuele F. Trogu.   

Abstract

The reactions of I(2) with ptc and ttb (title ligands) have been investigated in CHCl(3) solution at different temperatures by spectrophotometry. A least-squares method procedure provided evidence for the formation of the 1:1 adducts. Crystals of the latter have been analyzed by X-ray diffraction methods (both monoclinic, P2(1)/c; ptc.I(2), a = 8.691(6) Å, b = 9.010(6) Å, c = 13.237(5) Å, beta = 103.43(2) degrees, Z = 4, R = 0.0305; ttb.I(2), a = 12.090(6) Å, b = 6.433(5) Å, c = 15.731(6) Å, beta = 99.30(2) degrees, Z = 4, R = 0.0419). Both structures show that the thionic sulfur (in any case a CS(3) group inserted in a ring) is bound almost collinearly with the diiodine molecule. The d(S-I) separations are 2.755(2) and 2.805(3) Å in the ptc.I(2) and ttb.I(2) adducts, respectively, while d(I-I) is practically the same (2.812(2) Å). An evident stereochemical difference is that the S-I-I moiety is nearly coplanar with the CS(3) group in ptc.I(2) while it is upright in ttb.I(2). However, the feature is not expected to cause a major electronic difference. In order to reproduce the structural features, different ab initio approaches have been attempted, with the best results being obtained with the density functional method (DFT). Despite the S-I distances which are slightly longer than the experimental ones (by ca. 0.25 Å), the distribution of filled and empty frontier molecular orbitals (MOs) allows a good interpretation of the visible spectra. Also a rationalization of the sigma electronic density distributed over the three centers S-I-I has been attempted by qualitative MO theory (EHMO method). Provided the good agreement with the higher level calculations, the perturbation theory arguments highlight the variable sp hybridization at the central iodine atom as the electronic factor of importance. The strength of the donor (D) affects significantly the redistribution of six electrons over four atomic orbitals, and the classic model is revised as a four-orbital/six-electron one. Thus, it is pointed out that a major four-electron repulsion is exerted over the D-I or the I-I linkages with major consequences for their respective lengths.

Entities:  

Year:  1999        PMID: 11671184     DOI: 10.1021/ic9901867

Source DB:  PubMed          Journal:  Inorg Chem        ISSN: 0020-1669            Impact factor:   5.165


  5 in total

1.  Interaction of thioamides, selenoamides, and amides with diiodine.

Authors:  Sotiris K Hadjikakou; Nick Hadjiliadis
Journal:  Bioinorg Chem Appl       Date:  2006-12-13       Impact factor: 7.778

2.  Reactions Between Chalcogen Donors and Dihalogens/Interalogens: Typology of Products and Their Characterization by FT-Raman Spectroscopy.

Authors:  Massimiliano Arca; M Carla Aragoni; Francesco A Devillanova; Alessandra Garau; Francesco Isaia; Vito Lippolis; Annalisa Mancini; Gaetano Verani
Journal:  Bioinorg Chem Appl       Date:  2006-12-31       Impact factor: 7.778

3.  The nature of the chemical bond in linear three-body systems: from i3- to mixed chalcogen/halogen and trichalcogen moieties.

Authors:  M Carla Aragoni; Massimiliano Arca; Francesco A Devillanova; Alessandra Garau; Francesco Isaia; Vito Lippolis; Annalisa Mancini
Journal:  Bioinorg Chem Appl       Date:  2007       Impact factor: 7.778

4.  In Situ Assessment of Intrinsic Strength of X-I⋯OA-Type Halogen Bonds in Molecular Crystals with Periodic Local Vibrational Mode Theory.

Authors:  Yunwen Tao; Yue Qiu; Wenli Zou; Sadisha Nanayakkara; Seth Yannacone; Elfi Kraka
Journal:  Molecules       Date:  2020-03-30       Impact factor: 4.411

Review 5.  A Halogen Bonding Perspective on Iodothyronine Deiodinase Activity.

Authors:  Eric S Marsan; Craig A Bayse
Journal:  Molecules       Date:  2020-03-14       Impact factor: 4.411

  5 in total

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