Literature DB >> 11665577

Strategies for modeling the interactions of transmembrane helices of G protein-coupled receptors by geometric complementarity using the GRAMM computer algorithm.

Ilya A Vakser1, Sulin Jiang.   

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Year:  2002        PMID： 11665577     DOI： 10.1016/s0076-6879(02)43144-8

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN： 0076-6879            Impact factor:   1.600


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  8 in total

1.  The role of geometric complementarity in secondary structure packing: a systematic docking study.

Authors:  Sulin Jiang; Andrei Tovchigrechko; Ilya A Vakser
Journal:  Protein Sci       Date:  2003-08       Impact factor: 6.725

2.  Shorter side chains optimize helix-helix packing.

Authors:  Sulin Jiang; Ilya A Vakser
Journal:  Protein Sci       Date:  2004-04-09       Impact factor: 6.725

3.  The ruggedness of protein-protein energy landscape and the cutoff for 1/r(n) potentials.

Authors:  Anatoly M Ruvinsky; Ilya A Vakser
Journal:  Bioinformatics       Date:  2009-02-23       Impact factor: 6.937

4.  Preferential binding of an odor within olfactory receptors: a precursor to receptor activation.

Authors:  Peter C Lai; Brandon Guida; Jing Shi; Chiquito J Crasto
Journal:  Chem Senses       Date:  2014-01-07       Impact factor: 3.160

5.  Chasing funnels on protein-protein energy landscapes at different resolutions.

Authors:  Anatoly M Ruvinsky; Ilya A Vakser
Journal:  Biophys J       Date:  2008-05-30       Impact factor: 4.033

Review 6.  The crystallographic model of rhodopsin and its use in studies of other G protein-coupled receptors.

Authors:  Slawomir Filipek; David C Teller; Krzysztof Palczewski; Ronald Stenkamp
Journal:  Annu Rev Biophys Biomol Struct       Date:  2003-02-05

7.  Quaternary structure predictions of transmembrane proteins starting from the monomer: a docking-based approach.

Authors:  D Casciari; M Seeber; F Fanelli
Journal:  BMC Bioinformatics       Date:  2006-07-12       Impact factor: 3.169

8.  Evolution and cellular function of monothiol glutaredoxins: involvement in iron-sulphur cluster assembly.

Authors:  Felipe Vilella; Rui Alves; María Teresa Rodríguez-Manzaneque; Gemma Bellí; Swarna Swaminathan; Per Sunnerhagen; Enrique Herrero
Journal:  Comp Funct Genomics       Date:  2004
  8 in total

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