Literature DB >> 11594835

Commercially available 5'-DMT phosphoramidites as reagents for the synthesis of vinylphosphonate-linked oligonucleic acids.

S Abbas1, R D Bertram, C J Hayes.   

Abstract

[reaction: see text]. Commercially available cyanoethyl phosphoramidites derived from T, d(C), d(A), and d(G) were hydrolyzed (1H-tetrazole, MeCN/H2O) to give the corresponding H-phosphonates in excellent yields. Palladium(0)-catalyzed cross-coupling of each of these with the thymidine-derived vinylbromide 2 afforded the corresponding vinylphosphonate-linked dimers TT, d(C)T, d(A)T, and d(G)T in modest to good yields. The TT dimer was further elaborated to give a 5'-DMT-TT-3'-CEP building block, and this was used in the automated synthesis of the TpTTpT tetramer.

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Year:  2001        PMID: 11594835     DOI: 10.1021/ol0166045

Source DB:  PubMed          Journal:  Org Lett        ISSN: 1523-7052            Impact factor:   6.005


  7 in total

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Authors:  Ken Yamada; Samuel Hildebrand; Sarah M Davis; Rachael Miller; Faith Conroy; Ellen Sapp; Jillian Caiazzi; Julia F Alterman; Loic Roux; Dimas Echeverria; Matthew R Hassler; Edith L Pfister; Marian DiFiglia; Neil Aronin; Anastasia Khvorova
Journal:  Nucleic Acids Res       Date:  2021-12-02       Impact factor: 16.971

3.  The study of interactions between DNA and PcrA DNA helicase by using targeted molecular dynamic simulations.

Authors:  Hao Wang; Jiajia Cui; Wei Hong; Ian C Paterson; Charles A Laughton
Journal:  J Mol Model       Date:  2013-09-26       Impact factor: 1.810

4.  Design and synthesis of nucleolipids as possible activated precursors for oligomer formation via intramolecular catalysis: stability study and supramolecular organization.

Authors:  Kishore Lingam Gangadhara; Puneet Srivastava; Jef Rozenski; Henri-Philippe Mattelaer; Volker Leen; Wim Dehaen; Johan Hofkens; Eveline Lescrinier; Piet Herdewijn
Journal:  J Syst Chem       Date:  2014-12-09

5.  RPA alleviates the inhibitory effect of vinylphosphonate internucleotide linkages on DNA unwinding by BLM and WRN helicases.

Authors:  Patrick L Garcia; Glyn Bradley; Christopher J Hayes; Sussie Krintel; Panos Soultanas; Pavel Janscak
Journal:  Nucleic Acids Res       Date:  2004-07-15       Impact factor: 16.971

6.  Vinylphosphonate internucleotide linkages inhibit the activity of PcrA DNA helicase.

Authors:  Richard D Bertram; Christopher J Hayes; Panos Soultanas
Journal:  Biochemistry       Date:  2002-06-18       Impact factor: 3.162

7.  Effects of vinylphosphonate internucleotide linkages on the cleavage specificity of exonuclease III and on the activity of DNA polymerase I.

Authors:  Zara A Doddridge; Richard D Bertram; Christopher J Hayes; Panos Soultanas
Journal:  Biochemistry       Date:  2003-03-25       Impact factor: 3.162

  7 in total

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