Literature DB >> 11578205

Total synthesis of 2',3',4',5',5' '-(2)h(5)-ribonucleosides: the key building blocks for NMR structure elucidation of large RNA.

A Földesi1, A Trifonova, Z Dinya, J Chattopadhyaya.   

Abstract

The diastereospecific chemical syntheses of uridine-2',3',4',5',5' '-(2)H(5) (21a), adenosine-2',3',4',5',5' '-(2)H(5) (21b), cytidine-2',3',4',5',5' '-(2)H(5)(2)H(5) (21c), and guanosine-2',3',4',5',5' '-(2)H(5) (21d) (>97 atom % (2)H at C2', C3', C4', and C5'/C5' ') have been achieved for their use in the solution NMR structure determination of oligo-RNA by the Uppsala "NMR-window" concept (refs 4a-c, 5a, 6), in which a small (1)H segment is NMR-visible, while the rest is made NMR-invisible by incorporation of the deuterated blocks 21a-d. The deuterated ribonucleosides 21a-d have been prepared by the condensation of appropriately protected aglycone with 1-O-acetyl-2,3,5-tri-O-(4-toluoyl)-alpha/beta-D-ribofuranose-2,3,4,5,5'-(2)H(5) (19), which has been obtained via diastereospecific deuterium incorporation at the C2 center of appropriate D-ribose-(2)H(4) derivatives either through an oxidation-reduction-inversion sequence or a one-step deuterium-proton exchange in high overall yield (44% and 24%, respectively).

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Year:  2001        PMID: 11578205     DOI: 10.1021/jo010097n

Source DB:  PubMed          Journal:  J Org Chem        ISSN: 0022-3263            Impact factor:   4.354


  3 in total

Review 1.  Heavy atom labeled nucleotides for measurement of kinetic isotope effects.

Authors:  Benjamin P Weissman; Nan-Sheng Li; Darrin York; Michael Harris; Joseph A Piccirilli
Journal:  Biochim Biophys Acta       Date:  2015-03-27

2.  Stereoselective synthesis of (+)-5-thiosucrose and (+)-5-thioisosucrose.

Authors:  Atsushi Ueda; Jinhong Pi; Yui Makura; Masakazu Tanaka; Jun'ichi Uenishi
Journal:  RSC Adv       Date:  2020-03-06       Impact factor: 4.036

3.  Structure of the nucleotide radical formed during reaction of CDP/TTP with the E441Q-alpha2beta2 of E. coli ribonucleotide reductase.

Authors:  Hendrik Zipse; Erin Artin; Stanislaw Wnuk; Gregory J S Lohman; Debora Martino; Robert G Griffin; Sylwia Kacprzak; Martin Kaupp; Brian Hoffman; Marina Bennati; Joanne Stubbe; Nicholas Lees
Journal:  J Am Chem Soc       Date:  2009-01-14       Impact factor: 15.419

  3 in total

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