Literature DB >> 11570896

Binding and activation of thiamin diphosphate in acetohydroxyacid synthase.

A Bar-Ilan1, V Balan, K Tittmann, R Golbik, M Vyazmensky, G Hübner, Z Barak, D M Chipman.   

Abstract

Acetohydroxyacid synthases (AHASs) are biosynthetic thiamin diphosphate- (ThDP) and FAD-dependent enzymes. They are homologous to pyruvate oxidase and other members of a family of ThDP-dependent enzymes which catalyze reactions in which the first step is decarboxylation of a 2-ketoacid. AHAS catalyzes the condensation of the 2-carbon moiety, derived from the decarboxylation of pyruvate, with a second 2-ketoacid, to form acetolactate or acetohydroxybutyrate. A structural model for AHAS isozyme II (AHAS II) from Escherichia coli has been constructed on the basis of its homology with pyruvate oxidase from Lactobacillus plantarum (LpPOX). We describe here experiments which further test the model, and test whether the binding and activation of ThDP in AHAS involve the same structural elements and mechanism identified for homologous enzymes. Interaction of a conserved glutamate with the N1' of the ThDP aminopyrimidine moiety is involved in activation of the cofactor for proton exchange in several ThDP-dependent enzymes. In accord with this, the analogue N3'-pyridyl thiamin diphosphate does not support AHAS activity. Mutagenesis of Glu47, the putative conserved glutamate, decreases the rate of proton exchange at C-2 of bound ThDP by nearly 2 orders of magnitude and decreases the turnover rate for the mutants by about 10-fold. Mutant E47A also has altered substrate specificity, pH dependence, and other changes in properties. Mutagenesis of Asp428, presumed on the basis of the model to be the crucial carboxylate ligand to Mg(2+) in the "ThDP motif", leads to a decrease in the affinity of AHAS II for Mg(2+). While mutant D428N shows ThDP affinity close to that of the wild-type on saturation with Mg(2+), D428E has a decreased affinity for ThDP. These mutations also lead to dependence of the enzyme on K(+). These experiments demonstrate that AHAS binds and activates ThDP in the same way as do pyruvate decarboxylase, transketolase, and other ThDP-dependent enzymes. The biosynthetic activity of AHAS also involves many other factors beyond the binding and deprotonation of ThDP; changes in the ligands to ThDP can have interesting and unexpected effects on the reaction.

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Year:  2001        PMID: 11570896     DOI: 10.1021/bi0104524

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  8 in total

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Authors:  Rime Kerfah; Michael J Plevin; Ombeline Pessey; Olivier Hamelin; Pierre Gans; Jerome Boisbouvier
Journal:  J Biomol NMR       Date:  2014-11-28       Impact factor: 2.835

2.  Glyoxylate carboligase: a unique thiamin diphosphate-dependent enzyme that can cycle between the 4'-aminopyrimidinium and 1',4'-iminopyrimidine tautomeric forms in the absence of the conserved glutamate.

Authors:  Natalia Nemeria; Elad Binshtein; Hetalben Patel; Anand Balakrishnan; Ilan Vered; Boaz Shaanan; Ze'ev Barak; David Chipman; Frank Jordan
Journal:  Biochemistry       Date:  2012-09-25       Impact factor: 3.162

3.  Effects of deletions at the C-terminus of tobacco acetohydroxyacid synthase on the enzyme activity and cofactor binding.

Authors:  Joungmok Kim; Dong-Gil Beak; Young-Tae Kim; Jung-Do Choi; Moon-Young Yoon
Journal:  Biochem J       Date:  2004-11-15       Impact factor: 3.857

4.  The carboligation reaction of acetohydroxyacid synthase II: steady-state intermediate distributions in wild type and mutants by NMR.

Authors:  Kai Tittmann; Maria Vyazmensky; Gerhard Hübner; Ze'ev Barak; David M Chipman
Journal:  Proc Natl Acad Sci U S A       Date:  2005-01-07       Impact factor: 11.205

5.  Sulphoacetaldehyde acetyltransferase yields acetyl phosphate: purification from Alcaligenes defragrans and gene clusters in taurine degradation.

Authors:  Jürgen Ruff; Karin Denger; Alasdair M Cook
Journal:  Biochem J       Date:  2003-01-15       Impact factor: 3.857

6.  Molecular evolution of acetohydroxyacid synthase in bacteria.

Authors:  Yadi Liu; Yanyan Li; Xiaoyuan Wang
Journal:  Microbiologyopen       Date:  2017-08-06       Impact factor: 3.139

7.  Characterization of acetohydroxyacid synthase from the hyperthermophilic bacterium Thermotoga maritima.

Authors:  Mohammad S Eram; Benozir Sarafuddin; Frank Gong; Kesen Ma
Journal:  Biochem Biophys Rep       Date:  2015-08-28

8.  Pyruvate decarboxylase activity of the acetohydroxyacid synthase of Thermotoga maritima.

Authors:  Mohammad S Eram; Kesen Ma
Journal:  Biochem Biophys Rep       Date:  2016-07-16
  8 in total

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