Literature DB >> 11569563

AmpFlSTR Profiler Plus and AmpFlSTR COfiler analysis of tissues stored in GenoFix, a new tissue preservation solution for mass disaster DNA identification.

C J Frégeau1, H Vanstone, S Borys, D McLean, J A Maroun, H C Birnboin, R M Fourney.   

Abstract

A preliminary study was conducted to assess the capability of a new alcohol-based tissue fixative, GenoFix, to preserve DNA from biopsy tissues stored at room temperature and/or -20 degrees C in a freezer, for subsequent short tandem repeat (STR) DNA typing analysis. Fresh human smooth muscle samples were stored at room temperature in GenoFix for one month and up to one year and seven months before being processed using the megaplex STR systems, AmpFlSTR Profiler Plus and AmpFlSTR COfiler. Alternatively, muscle tissues in GenoFix were placed at -20 degrees C in a freezer for up to 3 1/2 years following two to three months in the fixative at room temperature. DNA analysis was also carried out on tissues stored in GenoFix for one month at room temperature and subsequently paraffin-embedded and stored at room temperature for four years. The AmpFlSTR Profiler Plus and AmpFlSTR COfiler STR profiles produced, using DNA extracted from all fixed tissue samples, were of very good quality. The fluorescent signals were well balanced across the nine STR loci or six loci comprised in the megaplexes surveyed and profiles showed no differences with those observed for the control blood of the respective donor patients. Continuous exposure to GenoFix at room temperature (up to one year and seven months) did not compromise the STR typing analysis of the fixed tissues. No adverse effects were noted on the STR typeability of tissues fixed with GenoFix and stored at -20 degrees C in a freezer for up to 3 1/2 years. STR profiles generated from the paraffin-embedded tissues fixed in GenoFix were of excellent quality. This preliminary study suggests that GenoFix can be used to store tissue samples at room temperature for up to one year and seven months or at -20 degrees C in a freezer for longer storage (up to 3 1/2 years). This new and odorless tissue fixative promotes tissue and DNA preservation in a very effective manner and as such may prove useful in criminal investigations or mass disaster identifications carried out in remote locations and in which a small or large number of tissue samples are collected for further analyses.

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Year:  2001        PMID: 11569563

Source DB:  PubMed          Journal:  J Forensic Sci        ISSN: 0022-1198            Impact factor:   1.832


  3 in total

Review 1.  DNA analysis in Disaster Victim Identification.

Authors:  Kerstin Montelius; Bertil Lindblom
Journal:  Forensic Sci Med Pathol       Date:  2011-10-19       Impact factor: 2.007

2.  The use of commercial alcohol products to sterilize bones prior to DNA sampling.

Authors:  Carl Winskog; Helena Nilsson; Kerstin Montelius; Bertil Lindblom
Journal:  Forensic Sci Med Pathol       Date:  2010-03-19       Impact factor: 2.007

3.  Long-term room temperature preservation of corpse soft tissue: an approach for tissue sample storage.

Authors:  Mariela Caputo; Luis A Bosio; Daniel Corach
Journal:  Investig Genet       Date:  2011-08-16
  3 in total

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