Literature DB >> 11568889

The Cancer Genome Anatomy Project: new resources for reading the molecular signatures of cancer.

R L Strausberg1.   

Abstract

The Cancer Genome Anatomy Project (CGAP) has built informational, technological, and physical resources to interface genomics with basic and clinical cancer research. The CGAP web site (http://cgap.nci.nih.gov) provides informatics tools for in silico analysis of the CGAP datasets as well as information for accessing each of the CGAP resources. Published in 2001 by John Wiley & Sons, Ltd.

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Mesh：

Year:  2001        PMID： 11568889     DOI： 10.1002/1096-9896(200109)195:1<31::AID-PATH920>3.0.CO;2-W

Source DB:  PubMed          Journal:  J Pathol        ISSN： 0022-3417            Impact factor:   7.996


  17 in total

1.  The novel human MOST-1 (C8orf17) gene exhibits tissue specific expression, maps to chromosome 8q24.2, and is overexpressed/amplified in high grade cancers of the breast and prostate.

Authors:  J M M Tan; E P C Tock; V T K Chow
Journal:  Mol Pathol       Date:  2003-04

2.  DPEP1, expressed in the early stages of colon carcinogenesis, affects cancer cell invasiveness.

Authors:  Yuji Toiyama; Yasuhiro Inoue; Hiromi Yasuda; Susumu Saigusa; Takeshi Yokoe; Yoshinaga Okugawa; Koji Tanaka; Chikao Miki; Masato Kusunoki
Journal:  J Gastroenterol       Date:  2010-09-08       Impact factor: 7.527

3.  The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

Authors:  Daniela S Gerhard; Lukas Wagner; Elise A Feingold; Carolyn M Shenmen; Lynette H Grouse; Greg Schuler; Steven L Klein; Susan Old; Rebekah Rasooly; Peter Good; Mark Guyer; Allison M Peck; Jeffery G Derge; David Lipman; Francis S Collins; Wonhee Jang; Steven Sherry; Mike Feolo; Leonie Misquitta; Eduardo Lee; Kirill Rotmistrovsky; Susan F Greenhut; Carl F Schaefer; Kenneth Buetow; Tom I Bonner; David Haussler; Jim Kent; Mark Kiekhaus; Terry Furey; Michael Brent; Christa Prange; Kirsten Schreiber; Nicole Shapiro; Narayan K Bhat; Ralph F Hopkins; Florence Hsie; Tom Driscoll; M Bento Soares; Tom L Casavant; Todd E Scheetz; Michael J Brown-stein; Ted B Usdin; Shiraki Toshiyuki; Piero Carninci; Yulan Piao; Dawood B Dudekula; Minoru S H Ko; Koichi Kawakami; Yutaka Suzuki; Sumio Sugano; C E Gruber; M R Smith; Blake Simmons; Troy Moore; Richard Waterman; Stephen L Johnson; Yijun Ruan; Chia Lin Wei; S Mathavan; Preethi H Gunaratne; Jiaqian Wu; Angela M Garcia; Stephen W Hulyk; Edwin Fuh; Ye Yuan; Anna Sneed; Carla Kowis; Anne Hodgson; Donna M Muzny; John McPherson; Richard A Gibbs; Jessica Fahey; Erin Helton; Mark Ketteman; Anuradha Madan; Stephanie Rodrigues; Amy Sanchez; Michelle Whiting; Anup Madari; Alice C Young; Keith D Wetherby; Steven J Granite; Peggy N Kwong; Charles P Brinkley; Russell L Pearson; Gerard G Bouffard; Robert W Blakesly; Eric D Green; Mark C Dickson; Alex C Rodriguez; Jane Grimwood; Jeremy Schmutz; Richard M Myers; Yaron S N Butterfield; Malachi Griffith; Obi L Griffith; Martin I Krzywinski; Nancy Liao; Ryan Morin; Ryan Morrin; Diana Palmquist; Anca S Petrescu; Ursula Skalska; Duane E Smailus; Jeff M Stott; Angelique Schnerch; Jacqueline E Schein; Steven J M Jones; Robert A Holt; Agnes Baross; Marco A Marra; Sandra Clifton; Kathryn A Makowski; Stephanie Bosak; Joel Malek
Journal:  Genome Res       Date:  2004-10       Impact factor: 9.043

4.  A multi-dimensional evidence-based candidate gene prioritization approach for complex diseases-schizophrenia as a case.

Authors:  Jingchun Sun; Peilin Jia; Ayman H Fanous; Bradley T Webb; Edwin J C G van den Oord; Xiangning Chen; Jozsef Bukszar; Kenneth S Kendler; Zhongming Zhao
Journal:  Bioinformatics       Date:  2009-07-14       Impact factor: 6.937

5.  Gene- and evidence-based candidate gene selection for schizophrenia and gene feature analysis.

Authors:  Jingchun Sun; Leng Han; Zhongming Zhao
Journal:  Artif Intell Med       Date:  2009-11-26       Impact factor: 5.326

6.  caCORE version 3: Implementation of a model driven, service-oriented architecture for semantic interoperability.

Authors:  George A Komatsoulis; Denise B Warzel; Francis W Hartel; Krishnakant Shanbhag; Ram Chilukuri; Gilberto Fragoso; Sherri de Coronado; Dianne M Reeves; Jillaine B Hadfield; Christophe Ludet; Peter A Covitz
Journal:  J Biomed Inform       Date:  2007-04-02       Impact factor: 6.317

7.  A computational/functional genomics approach for the enrichment of the retinal transcriptome and the identification of positional candidate retinopathy genes.

Authors:  Nicholas Katsanis; Kim C Worley; Guillermo Gonzalez; Stephen J Ansley; James R Lupski
Journal:  Proc Natl Acad Sci U S A       Date:  2002-10-21       Impact factor: 11.205

8.  Stochastic noise in splicing machinery.

Authors:  Eugene Melamud; John Moult
Journal:  Nucleic Acids Res       Date:  2009-06-22       Impact factor: 16.971

Review 9.  Bioinformatics for cancer immunology and immunotherapy.

Authors:  Pornpimol Charoentong; Mihaela Angelova; Mirjana Efremova; Ralf Gallasch; Hubert Hackl; Jerome Galon; Zlatko Trajanoski
Journal:  Cancer Immunol Immunother       Date:  2012-09-18       Impact factor: 6.968

10.  High-throughput analysis of promoter occupancy reveals direct neural targets of FOXP2, a gene mutated in speech and language disorders.

Authors:  Sonja C Vernes; Elizabeth Spiteri; Jérôme Nicod; Matthias Groszer; Jennifer M Taylor; Kay E Davies; Daniel H Geschwind; Simon E Fisher
Journal:  Am J Hum Genet       Date:  2007-10-31       Impact factor: 11.025
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