Literature DB >> 11566128

Modeling tricks and fitting techniques for multiresolution structures.

W Wriggers1, P Chacón.   

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Year:  2001        PMID： 11566128     DOI： 10.1016/s0969-2126(01)00648-7

Source DB:  PubMed          Journal:  Structure        ISSN： 0969-2126            Impact factor:   5.006


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  58 in total

1.  Placement of the structural proteins in Sindbis virus.

Authors:  Wei Zhang; Suchetana Mukhopadhyay; Sergei V Pletnev; Timothy S Baker; Richard J Kuhn; Michael G Rossmann
Journal:  J Virol       Date:  2002-11       Impact factor: 5.103

2.  Analysis of functional motions in Brownian molecular machines with an efficient block normal mode approach: myosin-II and Ca2+ -ATPase.

Authors:  Guohui Li; Qiang Cui
Journal:  Biophys J       Date:  2004-02       Impact factor: 4.033

3.  A core-weighted fitting method for docking atomic structures into low-resolution maps: application to cryo-electron microscopy.

Authors:  Xiongwu Wu; Jacqueline L S Milne; Mario J Borgnia; Alexey V Rostapshov; Sriram Subramaniam; Bernard R Brooks
Journal:  J Struct Biol       Date:  2003-01       Impact factor: 2.867

4.  Methods for generating high-resolution structural models from electron microscope tomography data.

Authors:  David B Ress; Mark L Harlow; Robert M Marshall; Uel J McMahan
Journal:  Structure       Date:  2004-10       Impact factor: 5.006

5.  Normal mode-based fitting of atomic structure into electron density maps: application to sarcoplasmic reticulum Ca-ATPase.

Authors:  Konrad Hinsen; Nathalie Reuter; Jorge Navaza; David L Stokes; Jean-Jacques Lacapère
Journal:  Biophys J       Date:  2004-11-12       Impact factor: 4.033

6.  Using Sculptor and Situs for simultaneous assembly of atomic components into low-resolution shapes.

Authors:  Stefan Birmanns; Mirabela Rusu; Willy Wriggers
Journal:  J Struct Biol       Date:  2010-11-13       Impact factor: 2.867

7.  Quantitative analysis of cryo-EM density map segmentation by watershed and scale-space filtering, and fitting of structures by alignment to regions.

Authors:  Grigore D Pintilie; Junjie Zhang; Thomas D Goddard; Wah Chiu; David C Gossard
Journal:  J Struct Biol       Date:  2010-03-23       Impact factor: 2.867

8.  Structure and transformation of bacteriophage A511 baseplate and tail upon infection of Listeria cells.

Authors:  Ricardo C Guerrero-Ferreira; Mario Hupfeld; Sergey Nazarov; Nicholas Mi Taylor; Mikhail M Shneider; Jagan M Obbineni; Martin J Loessner; Takashi Ishikawa; Jochen Klumpp; Petr G Leiman
Journal:  EMBO J       Date:  2019-01-02       Impact factor: 11.598

9.  Nanostructures of APOBEC3G support a hierarchical assembly model of high molecular mass ribonucleoprotein particles from dimeric subunits.

Authors:  Joseph E Wedekind; Richard Gillilan; Alena Janda; Jolanta Krucinska; Jason D Salter; Ryan P Bennett; Jay Raina; Harold C Smith
Journal:  J Biol Chem       Date:  2006-10-31       Impact factor: 5.157

10.  Three-dimensional reconstruction of tarantula myosin filaments suggests how phosphorylation may regulate myosin activity.

Authors:  Lorenzo Alamo; Willy Wriggers; Antonio Pinto; Fulvia Bártoli; Leiria Salazar; Fa-Qing Zhao; Roger Craig; Raúl Padrón
Journal:  J Mol Biol       Date:  2008-10-14       Impact factor: 5.469
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