Literature DB >> 11566123

Meanderings of the mRNA through the ribosome.

G M Culver1.   

Abstract

A map of how mRNA travels through the ribosome is critical for any detailed understanding of the process of translation. This feat has recently been achieved using X-ray crystallography. The structure reveals, for the first time, details of the interactions between the mRNA and the 30S subunit beyond those at the tRNA binding sites. Elements of both 16S rRNA and ribosomal proteins contribute to mRNA binding. This work also identifies two tunnels that the mRNA passes through as it wraps around the 30S subunit. The mechanisms and mechanics of reading frame selection, translational fidelity, and translocation can now be informed by the structure.

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Year:  2001        PMID: 11566123     DOI: 10.1016/s0969-2126(01)00649-9

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  13 in total

1.  RNA stem-loop enhanced expression of previously non-expressible genes.

Authors:  Michael Paulus; Martin Haslbeck; Manfred Watzele
Journal:  Nucleic Acids Res       Date:  2004-05-26       Impact factor: 16.971

Review 2.  Initiation of protein synthesis in bacteria.

Authors:  Brian Søgaard Laursen; Hans Peter Sørensen; Kim Kusk Mortensen; Hans Uffe Sperling-Petersen
Journal:  Microbiol Mol Biol Rev       Date:  2005-03       Impact factor: 11.056

3.  Secondary structure of bacteriophage T4 gene 60 mRNA: implications for translational bypassing.

Authors:  Gabrielle C Todd; Nils G Walter
Journal:  RNA       Date:  2013-03-14       Impact factor: 4.942

Review 4.  Fine-tuning gene expression for improved biosynthesis of natural products: From transcriptional to post-translational regulation.

Authors:  Chenyi Li; Tian Jiang; Michelle Li; Yusong Zou; Yajun Yan
Journal:  Biotechnol Adv       Date:  2021-10-09       Impact factor: 14.227

5.  A ribosome-nascent chain sensor of membrane protein biogenesis in Bacillus subtilis.

Authors:  Shinobu Chiba; Anne Lamsa; Kit Pogliano
Journal:  EMBO J       Date:  2009-09-24       Impact factor: 11.598

6.  Mathematical modeling of translation initiation for the estimation of its efficiency to computationally design mRNA sequences with desired expression levels in prokaryotes.

Authors:  Dokyun Na; Sunjae Lee; Doheon Lee
Journal:  BMC Syst Biol       Date:  2010-05-26

7.  Cracking pre-40S ribosomal subunit structure by systematic analyses of RNA-protein cross-linking.

Authors:  Sander Granneman; Elisabeth Petfalski; Agata Swiatkowska; David Tollervey
Journal:  EMBO J       Date:  2010-05-07       Impact factor: 11.598

8.  A comprehensive, quantitative, and genome-wide model of translation.

Authors:  Marlena Siwiak; Piotr Zielenkiewicz
Journal:  PLoS Comput Biol       Date:  2010-07-29       Impact factor: 4.475

9.  Metabolic engineering of Escherichia coli using synthetic small regulatory RNAs.

Authors:  Dokyun Na; Seung Min Yoo; Hannah Chung; Hyegwon Park; Jin Hwan Park; Sang Yup Lee
Journal:  Nat Biotechnol       Date:  2013-01-20       Impact factor: 54.908

10.  A translational riboswitch coordinates nascent transcription-translation coupling.

Authors:  Surajit Chatterjee; Adrien Chauvier; Shiba S Dandpat; Irina Artsimovitch; Nils G Walter
Journal:  Proc Natl Acad Sci U S A       Date:  2021-04-20       Impact factor: 11.205

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