Literature DB >> 1156576

Stereochemistry of propionyl-coenzyme A and pyruvate carboxylations catalyzed by transcarboxylase.

Y F Cheung, C H Fung, C Walsh.   

Abstract

The stereochemistry of the two half-reactions catalyzed by the biotin-containing enzyme, transcarboxy-lase from Propionobacteria shermanii, has been determined. The pro-R hydrogen at C-2 of propionyl-coenzyme A is replaced by CO2 in formation of the S isomer of methylmalonyl-CoA, defining the process as retention of configuration. This C-2 hydrogen is abstracted at a rate identical with product formation. For the other half-reaction, pyruvate to oxalacetate, the chiral methyl group methodology of Rose (I. A. Rose (1970), J. Biol. Chem. 245, 6052) was employed. First, it was determined with [3-2-He]pyruvate that a kinetic deuterium isotope effect of 2.1 occurs at Vmax in this carboxyl transfer, indicating that the necessary requirement for discrimination against heavy isotopes of hydrogen existed. Then, 3(S)-[3-2-H,3-H]pyruvate, generated from 3(S)-]E-2-H,3-H]phosphoglycerate, was carboxylated and the oxalacetate trapped as [3030H]malate using malate dehydrogenase. Exhaustive incubation of the tritiated malate (3-H/14-C = 1.95) with fumarase to labilize the pro-R hydrogen at C-3 resulted in release of 65% of the tritium into water. Reisolation of the malate after fumarase action yielded a 30H/14-C ration of 0.67, indicating 34% retention as expected. The theoretical enantiotopic distribution for the observed k1H/k2H of 2.1 is 68:32. Selective enrichment of tritium in the pro-R position at C-3 of malate indicates enzymatic carboxylation of pyruvate with retention of configuration in this half-reaction also.

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Year:  1975        PMID: 1156576     DOI: 10.1021/bi00684a029

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  4 in total

1.  Proton transfer in methylmalonyl-CoA epimerase from Propionibacterium shermanii. The reaction of (2R)-methylmalonyl-CoA in tritiated water.

Authors:  J Q Fuller; P F Leadlay
Journal:  Biochem J       Date:  1983-09-01       Impact factor: 3.857

2.  Proton transfer in methylmalonyl-CoA epimerase from Propionibacterium shermanii. Studies with specifically tritiated (2R)-methylmalonyl-CoA as substrate.

Authors:  P F Leadlay; J Q Fuller
Journal:  Biochem J       Date:  1983-09-01       Impact factor: 3.857

3.  Nonlinear machine learning pattern recognition and bacteria-metabolite multilayer network analysis of perturbed gastric microbiome.

Authors:  Claudio Durán; Sara Ciucci; Alessandra Palladini; Umer Z Ijaz; Antonio G Zippo; Francesco Paroni Sterbini; Luca Masucci; Giovanni Cammarota; Gianluca Ianiro; Pirjo Spuul; Michael Schroeder; Stephan W Grill; Bryony N Parsons; D Mark Pritchard; Brunella Posteraro; Maurizio Sanguinetti; Giovanni Gasbarrini; Antonio Gasbarrini; Carlo Vittorio Cannistraci
Journal:  Nat Commun       Date:  2021-03-26       Impact factor: 14.919

4.  Short chain fatty acids produced by Cutibacterium acnes inhibit biofilm formation by Staphylococcus epidermidis.

Authors:  Kouki Nakamura; Alan M O'Neill; Michael R Williams; Laura Cau; Teruaki Nakatsuji; Alexander R Horswill; Richard L Gallo
Journal:  Sci Rep       Date:  2020-12-04       Impact factor: 4.379

  4 in total

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