Literature DB >> 11556396

Complete genome sequence of transmissible gastroenteritis coronavirus PUR46-MAD clone and evolution of the purdue virus cluster.

Z Penzes1, J M Gonzalez, E Calvo, A Izeta, C Smerdou, A Méndez, C M Sanchez, I Sola, F Almazan, L Enjuanes.   

Abstract

The complete sequence (28580 nt) of the PUR46-MAD clone of the Purdue cluster of transmissible gastroenteritis coronavirus (TGEV) has been determined and compared with members of this cluster and other coronaviruses. The computing distances among their S gene sequences resulted in the grouping of these coronaviruses into four clusters, one of them exclusively formed by the Purdue viruses. Three new potential sequence motifs with homology to the alpha-subunit of the polymerase-associated nucleocapsid phosphoprotein of rinderpest virus, the Bowman-Birk type of proteinase inhibitors, and the metallothionein superfamily of cysteine rich chelating proteins have been identified. Comparison of the TGEV polymerase sequence with that of other RNA viruses revealed high sequence homology with the A-E domains of the palm subdomain of nucleic acid polymerases.

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Mesh：

Year:  2001        PMID： 11556396      PMCID： PMC7088808          DOI： 10.1023/a:1011147832586

Source DB:  PubMed          Journal:  Virus Genes        ISSN： 0920-8569            Impact factor:   2.332


  60 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  1998-03-31       Impact factor: 11.205

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Journal:  Methods Enzymol       Date:  1996       Impact factor: 1.600

3.  Targeted recombination demonstrates that the spike gene of transmissible gastroenteritis coronavirus is a determinant of its enteric tropism and virulence.

Authors:  C M Sánchez; A Izeta; J M Sánchez-Morgado; S Alonso; I Sola; M Balasch; J Plana-Durán; L Enjuanes
Journal:  J Virol       Date:  1999-09       Impact factor: 5.103

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Journal:  J Virol       Date:  1980-05       Impact factor: 5.103

5.  Crystal structure of Dengue virus NS3 protease in complex with a Bowman-Birk inhibitor: implications for flaviviral polyprotein processing and drug design.

Authors:  H M Murthy; K Judge; L DeLucas; R Padmanabhan
Journal:  J Mol Biol       Date:  2000-08-25       Impact factor: 5.469

6.  Replication and packaging of transmissible gastroenteritis coronavirus-derived synthetic minigenomes.

Authors:  A Izeta; C Smerdou; S Alonso; Z Penzes; A Mendez; J Plana-Durán; L Enjuanes
Journal:  J Virol       Date:  1999-02       Impact factor: 5.103

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Journal:  Vet Res       Date:  1993       Impact factor: 3.683

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Authors:  R D Wesley; R D Woods; A K Cheung
Journal:  J Virol       Date:  1991-06       Impact factor: 5.103

9.  Enteric coronavirus TGEV: partial sequence of the genomic RNA, its organization and expression.

Authors:  D Rasschaert; J Gelfi; H Laude
Journal:  Biochimie       Date:  1987 Jun-Jul       Impact factor: 4.079

10.  Sequence analysis of the porcine transmissible gastroenteritis coronavirus nucleocapsid protein gene.

Authors:  P A Kapke; D A Brian
Journal:  Virology       Date:  1986-05       Impact factor: 3.616
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  55 in total

1.  Role of nucleotides immediately flanking the transcription-regulating sequence core in coronavirus subgenomic mRNA synthesis.

Authors:  Isabel Sola; José L Moreno; Sonia Zúñiga; Sara Alonso; Luis Enjuanes
Journal:  J Virol       Date:  2005-02       Impact factor: 5.103

2.  A point mutation within the replicase gene differentially affects coronavirus genome versus minigenome replication.

Authors:  Carmen Galán; Luis Enjuanes; Fernando Almazán
Journal:  J Virol       Date:  2005-12       Impact factor: 5.103

3.  Organization of two transmissible gastroenteritis coronavirus membrane protein topologies within the virion and core.

Authors:  D Escors; E Camafeita; J Ortego; H Laude; L Enjuanes
Journal:  J Virol       Date:  2001-12       Impact factor: 5.103

4.  Complete genome sequence of a Chinese virulent porcine epidemic diarrhea virus strain.

Authors:  Jianfei Chen; Chengbao Wang; Hongyan Shi; Hua-Ji Qiu; Shengwang Liu; Da Shi; Xin Zhang; Li Feng
Journal:  J Virol       Date:  2011-11       Impact factor: 5.103

5.  Molecular characterization of a new species in the genus Alphacoronavirus associated with mink epizootic catarrhal gastroenteritis.

Authors:  Anastasia N Vlasova; Rebecca Halpin; Shiliang Wang; Elodie Ghedin; David J Spiro; Linda J Saif
Journal:  J Gen Virol       Date:  2011-02-23       Impact factor: 3.891

6.  Long-distance RNA-RNA interactions in the coronavirus genome form high-order structures promoting discontinuous RNA synthesis during transcription.

Authors:  Pedro A Mateos-Gomez; Lucia Morales; Sonia Zuñiga; Luis Enjuanes; Isabel Sola
Journal:  J Virol       Date:  2012-10-10       Impact factor: 5.103

7.  Generation of a replication-competent, propagation-deficient virus vector based on the transmissible gastroenteritis coronavirus genome.

Authors:  Javier Ortego; David Escors; Hubert Laude; Luis Enjuanes
Journal:  J Virol       Date:  2002-11       Impact factor: 5.103

8.  Identification of a coronavirus transcription enhancer.

Authors:  José L Moreno; Sonia Zúñiga; Luis Enjuanes; Isabel Sola
Journal:  J Virol       Date:  2008-02-13       Impact factor: 5.103

9.  Complete genome of transmissible gastroenteritis virus AYU strain isolated in Shanghai, China.

Authors:  Yixuan Hou; Xiuwei Yue; Xuehui Cai; Shujie Wang; Yonggang Liu; Congli Yuan; Li Cui; Xiuguo Hua; Zhibiao Yang
Journal:  J Virol       Date:  2012-11       Impact factor: 5.103

10.  Transmissible gastroenteritis coronavirus genome packaging signal is located at the 5' end of the genome and promotes viral RNA incorporation into virions in a replication-independent process.

Authors:  Lucia Morales; Pedro A Mateos-Gomez; Carmen Capiscol; Lorena del Palacio; Luis Enjuanes; Isabel Sola
Journal:  J Virol       Date:  2013-08-21       Impact factor: 5.103
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