Literature DB >> 11554309

DNA damage recognition and repair pathway coordination revealed by the structural biochemistry of DNA repair enzymes.

D J Hosfield1, D S Daniels, C D Mol, C D Putnam, S S Parikh, J A Tainer.   

Abstract

Cells have evolved distinct mechanisms for both preventing and removing mutagenic and lethal DNA damage. Structural and biochemical characterization of key enzymes that function in DNA repair pathways are illuminating the biological and chemical mechanisms that govern initial lesion detection, recognition, and excision repair of damaged DNA. These results are beginning to reveal a higher level of DNA repair coordination that ensures the faithful repair of damaged DNA. Enzyme-induced DNA distortions allow for the specific recognition of distinct extrahelical lesions, as well as tight binding to cleaved products, which has implications for the ordered transfer of unstable DNA repair intermediates between enzymes during base excision repair.

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Year:  2001        PMID: 11554309     DOI: 10.1016/s0079-6603(01)68110-8

Source DB:  PubMed          Journal:  Prog Nucleic Acid Res Mol Biol        ISSN: 0079-6603


  10 in total

Review 1.  Base excision repair in nucleosome substrates.

Authors:  Indu Jagannathan; Hope A Cole; Jeffrey J Hayes
Journal:  Chromosome Res       Date:  2006-03-03       Impact factor: 5.239

Review 2.  Regulation of endonuclease activity in human nucleotide excision repair.

Authors:  Adebanke F Fagbemi; Barbara Orelli; Orlando D Schärer
Journal:  DNA Repair (Amst)       Date:  2011-05-17

3.  AP endonuclease paralogues with distinct activities in DNA repair and bacterial pathogenesis.

Authors:  Elisabeth P Carpenter; Anne Corbett; Hellen Thomson; Jolanta Adacha; Kirsten Jensen; Julien Bergeron; Ioannis Kasampalidis; Rachel Exley; Megan Winterbotham; Christoph Tang; Geoff S Baldwin; Paul Freemont
Journal:  EMBO J       Date:  2007-02-22       Impact factor: 11.598

4.  Human AP endonuclease 1 stimulates multiple-turnover base excision by alkyladenine DNA glycosylase.

Authors:  Michael R Baldwin; Patrick J O'Brien
Journal:  Biochemistry       Date:  2009-06-30       Impact factor: 3.162

5.  Substrate binding pocket residues of human alkyladenine-DNA glycosylase critical for methylating agent survival.

Authors:  Cheng-Yao Chen; Haiwei H Guo; Dharini Shah; A Blank; Leona D Samson; Lawrence A Loeb
Journal:  DNA Repair (Amst)       Date:  2008-08-29

6.  Escherichia coli nucleoside diphosphate kinase is a uracil-processing DNA repair nuclease.

Authors:  Edith H Postel; Bozena M Abramczyk
Journal:  Proc Natl Acad Sci U S A       Date:  2003-10-29       Impact factor: 11.205

Review 7.  Novel aspects of macromolecular repair and relationship to human disease.

Authors:  Hans E Krokan; Bodil Kavli; Geir Slupphaug
Journal:  J Mol Med (Berl)       Date:  2004-02-24       Impact factor: 4.599

8.  Neil DNA glycosylases promote substrate turnover by Tdg during DNA demethylation.

Authors:  Lars Schomacher; Dandan Han; Michael U Musheev; Khelifa Arab; Sabine Kienhöfer; Annika von Seggern; Christof Niehrs
Journal:  Nat Struct Mol Biol       Date:  2016-01-11       Impact factor: 15.369

Review 9.  Archaeal genome guardians give insights into eukaryotic DNA replication and damage response proteins.

Authors:  David S Shin; Ashley J Pratt; John A Tainer
Journal:  Archaea       Date:  2014-02-20       Impact factor: 3.273

10.  Looking for Waldo: a potential thermodynamic signature to DNA damage.

Authors:  Barry Gold; Michael P Stone; Luis A Marky
Journal:  Acc Chem Res       Date:  2014-04-04       Impact factor: 22.384

  10 in total

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