Literature DB >> 11552342

Terminology tools: state of the art and practical lessons.

J J Cimino1.   

Abstract

OBJECTIVES: As controlled medical terminologies evolve from simple code-name-hierarchy arrangements, into rich, knowledge-based ontologies of medical concepts, increased demands are placed on both the developers and users of the terminologies. In response, researchers have begun developing tools to address their needs. The aims of this article are to review previous work done to develop these tools and then to describe work done at Columbia University and New York Presbyterian Hospital (NYPH).
METHODS: Researchers working with the Systematized Nomenclature of Medicine (SNOMED), the Unified Medical Language System (UMLS), and NYPH's Medical Entities Dictionary (MED) have created a wide variety of terminology browsers, editors and servers to facilitate creation, maintenance and use of these terminologies.
RESULTS: Although much work has been done, no generally available tools have yet emerged. Consensus on requirement for tool functions, especially terminology servers is emerging. Tools at NYPH have been used successfully to support the integration of clinical applications and the merger of health care institutions.
CONCLUSIONS: Significant advancement has occurred over the past fifteen years in the development of sophisticated controlled terminologies and the tools to support them. The tool set at NYPH provides a case study to demonstrate one feasible architecture.

Entities:  

Mesh:

Year:  2001        PMID: 11552342

Source DB:  PubMed          Journal:  Methods Inf Med        ISSN: 0026-1270            Impact factor:   2.176


  10 in total

1.  XML representation of hierarchical classification systems: from conceptual models to real applications.

Authors:  Simon Hoelzer; Ralf K Schweiger; Raymond Liu; Dirk Rudolf; Joerg Rieger; Joachim Dudeck
Journal:  Proc AMIA Symp       Date:  2002

2.  A "systematics" tool for medical terminologies.

Authors:  Ying Tao; Eneida A Mendonca; Yves A Lussier
Journal:  AMIA Annu Symp Proc       Date:  2003

3.  Creation of a master table for checking indication and contraindication of medicine from a knowledge base linked with a thesaurus.

Authors:  Shanmei Ji; Yasushi Matsumura; Shigeki Kuwata; Hirohiko Nakano; Yufeng Chen; Tadamasa Teratani; Qiyan Zhang; Takahiro Mineno; Hiroshi Takeda
Journal:  J Med Syst       Date:  2004-12       Impact factor: 4.460

4.  Variation of SNOMED CT coding of clinical research concepts among coding experts.

Authors:  James E Andrews; Rachel L Richesson; Jeffrey Krischer
Journal:  J Am Med Inform Assoc       Date:  2007-04-25       Impact factor: 4.497

Review 5.  A review of auditing methods applied to the content of controlled biomedical terminologies.

Authors:  Xinxin Zhu; Jung-Wei Fan; David M Baorto; Chunhua Weng; James J Cimino
Journal:  J Biomed Inform       Date:  2009-03-12       Impact factor: 6.317

6.  Using the LOINC Semantic Structure to Integrate Community-based Survey Items into a Concept-based Enterprise Data Dictionary to Support Comparative Effectiveness Research.

Authors:  Manuel C Co; Bernadette Boden-Albala; Leigh Quarles; Adam Wilcox; Suzanne Bakken
Journal:  NI 2012 (2012)       Date:  2012-06-23

7.  The evolving use of a clinical data repository: facilitating data access within an electronic medical record.

Authors:  Adam B Wilcox; David K Vawdrey; Yueh-Hsia Chen; Bruce Forman; George Hripcsak
Journal:  AMIA Annu Symp Proc       Date:  2009-11-14

8.  The state of the art in clinical knowledge management: an inventory of tools and techniques.

Authors:  Dean F Sittig; Adam Wright; Linas Simonaitis; James D Carpenter; George O Allen; Bradley N Doebbeling; Anwar Mohammad Sirajuddin; Joan S Ash; Blackford Middleton
Journal:  Int J Med Inform       Date:  2009-10-14       Impact factor: 4.046

9.  Development and application of a framework for maintenance of medical terminological systems.

Authors:  Ferishta Bakhshi-Raiez; Ronald Cornet; Nicolette F de Keizer
Journal:  J Am Med Inform Assoc       Date:  2008-06-25       Impact factor: 4.497

10.  A unified structural/terminological interoperability framework based on LexEVS: application to TRANSFoRm.

Authors:  Jean-François Ethier; Olivier Dameron; Vasa Curcin; Mark M McGilchrist; Robert A Verheij; Theodoros N Arvanitis; Adel Taweel; Brendan C Delaney; Anita Burgun
Journal:  J Am Med Inform Assoc       Date:  2013-04-09       Impact factor: 4.497

  10 in total

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