Literature DB >> 11551506

Crystal structure of LexA: a conformational switch for regulation of self-cleavage.

Y Luo1, R A Pfuetzner, S Mosimann, M Paetzel, E A Frey, M Cherney, B Kim, J W Little, N C Strynadka.   

Abstract

LexA repressor undergoes a self-cleavage reaction. In vivo, this reaction requires an activated form of RecA, but it occurs spontaneously in vitro at high pH. Accordingly, LexA must both allow self-cleavage and yet prevent this reaction in the absence of a stimulus. We have solved the crystal structures of several mutant forms of LexA. Strikingly, two distinct conformations are observed, one compatible with cleavage, and the other in which the cleavage site is approximately 20 A from the catalytic center. Our analysis provides insight into the structural and energetic features that modulate the interconversion between these two forms and hence the rate of the self-cleavage reaction. We suggest RecA activates the self-cleavage of LexA and related proteins through selective stabilization of the cleavable conformation.

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Year:  2001        PMID: 11551506     DOI: 10.1016/s0092-8674(01)00479-2

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  76 in total

1.  Structure of malonamidase E2 reveals a novel Ser-cisSer-Lys catalytic triad in a new serine hydrolase fold that is prevalent in nature.

Authors:  Sejeong Shin; Tae-Hee Lee; Nam-Chul Ha; Hyun Min Koo; So-Yeon Kim; Heung-Soo Lee; Yu Sam Kim; Byung-Ha Oh
Journal:  EMBO J       Date:  2002-06-03       Impact factor: 11.598

2.  Overexpression of the recA gene decreases oral but not intraperitoneal fitness of Salmonella enterica.

Authors:  Laura Medina-Ruiz; Susana Campoy; Cristina Latasa; Paula Cardenas; Juan Carlos Alonso; Jordi Barbé
Journal:  Infect Immun       Date:  2010-05-10       Impact factor: 3.441

3.  Latent ClpX-recognition signals ensure LexA destruction after DNA damage.

Authors:  Saskia B Neher; Julia M Flynn; Robert T Sauer; Tania A Baker
Journal:  Genes Dev       Date:  2003-05-01       Impact factor: 11.361

4.  The preferred substrate for RecA-mediated cleavage of bacteriophage 434 repressor is the DNA-bound dimer.

Authors:  David R Pawlowski; Gerald B Koudelka
Journal:  J Bacteriol       Date:  2004-01       Impact factor: 3.490

5.  pH-dependent autocleavage of lambda repressor occurs in the operator-bound form: characterization of lambda repressor autocleavage.

Authors:  Kaushik Ghosh; Atasi Pal; Rajagopal Chattopadhyaya
Journal:  Biochem J       Date:  2004-04-15       Impact factor: 3.857

6.  Crystallization and preliminary X-ray studies of the C-terminal domain of Mycobacterium tuberculosis LexA.

Authors:  Anu V Chandran; J Rajan Prabu; G P Manjunath; K Neelakanteshwar Patil; K Muniyappa; M Vijayan
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-08-28

7.  Differences in LexA regulon structure among Proteobacteria through in vivo assisted comparative genomics.

Authors:  Ivan Erill; Mónica Jara; Noelia Salvador; Marcos Escribano; Susana Campoy; Jordi Barbé
Journal:  Nucleic Acids Res       Date:  2004-12-16       Impact factor: 16.971

8.  Purification and characterization of the repressor of the shiga toxin-encoding bacteriophage 933W: DNA binding, gene regulation, and autocleavage.

Authors:  Astrid P Koudelka; Lisa A Hufnagel; Gerald B Koudelka
Journal:  J Bacteriol       Date:  2004-11       Impact factor: 3.490

9.  Expression, purification and crystallization of a birnavirus-encoded protease, VP4, from blotched snakehead virus (BSNV).

Authors:  Jaeyong Lee; Anat R Feldman; Bernard Delmas; Mark Paetzel
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-03-10

10.  Intracellular d-Serine Accumulation Promotes Genetic Diversity via Modulated Induction of RecA in Enterohemorrhagic Escherichia coli.

Authors:  James P R Connolly; Andrew J Roe
Journal:  J Bacteriol       Date:  2016-11-18       Impact factor: 3.490

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