Literature DB >> 11545693

Neuroscience databases: tools for exploring brain structure-function relationships.

R Kötter1.   

Abstract

Faster than ever, neuroscience is generating vast amounts of data that await cross-referencing, comparison, integration and interpretation in the endeavour to unravel the mechanisms of the brain. The complex, diverse and distributed nature of these data requires the development of advanced neuroinformatics methodologies for databases and associated tools that are now beginning to emerge. This paper presents an overview of current issues in the representation, integration and analysis of neuroscience data from molecular to brain systems levels, including issues of implementation, standardization, management, quality control, copyright, confidentiality and acceptance. Particular emphasis is given to integrative neuroinformatics approaches for exploring structure-function relationships in the brain.

Mesh:

Year:  2001        PMID: 11545693      PMCID: PMC1088505          DOI: 10.1098/rstb.2001.0902

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  17 in total

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Authors:  Maryann E Martone; Shenglan Zhang; Amarnath Gupta; Xufei Qian; Haiyun He; Diana L Price; Mona Wong; Simone Santini; Mark H Ellisman
Journal:  Neuroinformatics       Date:  2003

2.  Introduction: multimodal neuroimaging of brain connectivity.

Authors:  Pedro A Valdés-Sosa; Rolf Kötter; Karl J Friston
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2005-05-29       Impact factor: 6.237

3.  Improving the analysis, storage and sharing of neuroimaging data using relational databases and distributed computing.

Authors:  Uri Hasson; Jeremy I Skipper; Michael J Wilde; Howard C Nusbaum; Steven L Small
Journal:  Neuroimage       Date:  2007-09-21       Impact factor: 6.556

4.  MatOFF: a tool for analyzing behaviorally complex neurophysiological experiments.

Authors:  Aldo Genovesio; Andrew R Mitz
Journal:  J Neurosci Methods       Date:  2007-05-29       Impact factor: 2.390

5.  Consciousness related neural events viewed as brain state space transitions.

Authors:  Gerhard Werner
Journal:  Cogn Neurodyn       Date:  2008-04-13       Impact factor: 5.082

6.  Brede tools and federating online neuroinformatics databases.

Authors:  Finn Årup Nielsen
Journal:  Neuroinformatics       Date:  2014-01

7.  Neurovascular Network Explorer 2.0: A Simple Tool for Exploring and Sharing a Database of Optogenetically-evoked Vasomotion in Mouse Cortex In Vivo.

Authors:  Hana Uhlirova; Peifang Tian; Kıvılcım Kılıç; Martin Thunemann; Vishnu B Sridhar; Radim Chmelik; Hauke Bartsch; Anders M Dale; Anna Devor; Payam A Saisan
Journal:  J Vis Exp       Date:  2018-05-04       Impact factor: 1.355

8.  Integration of Neuroimaging and Microarray Datasets through Mapping and Model-Theoretic Semantic Decomposition of Unstructured Phenotypes.

Authors:  Spiro P Pantazatos; Jianrong Li; Paul Pavlidis; Yves A Lussier
Journal:  Cancer Inform       Date:  2009-06-08

9.  Spatial Point Pattern Analysis of Neurons Using Ripley's K-Function in 3D.

Authors:  Mehrdad Jafari-Mamaghani; Mikael Andersson; Patrik Krieger
Journal:  Front Neuroinform       Date:  2010-05-21       Impact factor: 4.081

Review 10.  Biological constraints on neural network models of cognitive function.

Authors:  Friedemann Pulvermüller; Rosario Tomasello; Malte R Henningsen-Schomers; Thomas Wennekers
Journal:  Nat Rev Neurosci       Date:  2021-06-28       Impact factor: 34.870

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