Literature DB >> 11544457

Association between a new polymorphism in the activation-induced cytidine deaminase gene and atopic asthma and the regulation of total serum IgE levels.

E Noguchi1, M Shibasaki, M Inudou, M Kamioka, Y Yokouchi, K Yamakawa-Kobayashi, H Hamaguchi, A Matsui, T Arinami.   

Abstract

BACKGROUND: Activation-induced cytidine deaminase (AICDA) is a recently identified RNA-editing deaminase that plays an important role in class-switching. Defects in AICDA result in a hyper-IgM phenotype and lack of IgG, IgA, and IgE in both human beings and mice.
OBJECTIVE: The aim of this study was to determine whether the AICDA gene is related to regulation of total serum IgE and development of atopic asthma.
METHODS: We screened for polymorphisms in the 5;-flanking and coding regions of the AICDA gene in subjects with atopic asthma and analyzed the effect of these polymorphisms on the development of atopic asthma and on total serum IgE levels in Japanese asthmatic families.
RESULTS: We identified 3 novel polymorphisms (5923A/G, 7888C/T, and 8578A/C) and 1 rare variant (Arg25Cys) in the AICDA gene. Transmission disequilibrium testing showed that the 7888C allele was transmitted preferentially to asthma-affected children (P =.007). Mean log [total serum IgE] levels of parents with the 7888C/7888C, 7888C/7888T, and 7888T/7888T genotypes were 2.12, 1.99, and 1.77, respectively, and a significant association was observed between the genotypes (P =.02). In RT-PCR experiments, we found 2 novel splice variants of AICDA, one lacking all of exon 4 (variant 1; 367 base pairs) and the other lacking the first 30 base pairs of exon 4 (variant 2; 453 base pairs). These variants were not associated with the 7888C/T polymorphism.
CONCLUSION: The 7888C/T polymorphism might be associated with the pathogenesis of atopic asthma and the regulation of total serum IgE levels.

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Year:  2001        PMID: 11544457     DOI: 10.1067/mai.2001.117456

Source DB:  PubMed          Journal:  J Allergy Clin Immunol        ISSN: 0091-6749            Impact factor:   10.793


  10 in total

1.  No association between AICDA 7888 C/T polymorphism, Helicobacter pylori seropositivity, and the risk of atrophic gastritis and gastric cancer in Japanese.

Authors:  Asahi Hishida; Keitaro Matsuo; Yasuyuki Goto; Yoko Mitsuda; Akio Hiraki; Mariko Naito; Kenji Wakai; Kazuo Tajima; Nobuyuki Hamajima
Journal:  Gastric Cancer       Date:  2010-04-07       Impact factor: 7.370

2.  Requirement of the RNA-editing enzyme ADAR2 for normal physiology in mice.

Authors:  Marion Horsch; Peter H Seeburg; Thure Adler; Juan Antonio Aguilar-Pimentel; Lore Becker; Julia Calzada-Wack; Lilian Garrett; Alexander Götz; Wolfgang Hans; Miyoko Higuchi; Sabine M Hölter; Beatrix Naton; Cornelia Prehn; Oliver Puk; Ildikó Rácz; Birgit Rathkolb; Jan Rozman; Anja Schrewe; Jerzy Adamski; Dirk H Busch; Irene Esposito; Jochen Graw; Boris Ivandic; Martin Klingenspor; Thomas Klopstock; Martin Mempel; Markus Ollert; Holger Schulz; Eckhard Wolf; Wolfgang Wurst; Andreas Zimmer; Valérie Gailus-Durner; Helmut Fuchs; Martin Hrabe de Angelis; Johannes Beckers
Journal:  J Biol Chem       Date:  2011-04-05       Impact factor: 5.157

3.  Polymorphisms of IL-4, IL-4R alpha, and AICDA genes in adult allergic asthma.

Authors:  Tianpen Cui; Lin Wang; Jianmin Wu; Lihua Hu; Jungang Xie
Journal:  J Huazhong Univ Sci Technolog Med Sci       Date:  2003

4.  Alternative splicing regulates activation-induced cytidine deaminase (AID): implications for suppression of AID mutagenic activity in normal and malignant B cells.

Authors:  Xiaosheng Wu; Jaime R Darce; Sook Kyung Chang; Grzegorz S Nowakowski; Diane F Jelinek
Journal:  Blood       Date:  2008-08-06       Impact factor: 22.113

5.  Linkage and association of childhood asthma with the chromosome 12 genes.

Authors:  Chenchen Shao; Yoichi Suzuki; Fumiaki Kamada; Kiyoshi Kanno; Mayumi Tamari; Koichi Hasegawa; Yoko Aoki; Shigeo Kure; Xue Yang; Hiroko Endo; Reiko Takayanagi; Chifuyu Nakazawa; Toshio Morikawa; Miki Morikawa; Shigeaki Miyabayashi; Yasushi Chiba; Minoru Karahashi; Seichi Saito; Gen Tamura; Taro Shirakawa; Yoichi Matsubara
Journal:  J Hum Genet       Date:  2004-02-07       Impact factor: 3.172

6.  Splice variants of activation induced deaminase (AID) do not affect the efficiency of class switch recombination in murine CH12F3 cells.

Authors:  Cesare Sala; Giorgio Mattiuz; Silvia Pietrobono; Andrea Chicca; Silvestro G Conticello
Journal:  PLoS One       Date:  2015-03-24       Impact factor: 3.240

7.  COVID-19 diverse outcomes: Aggravated reinfection, type I interferons and antibodies.

Authors:  Rafael Cardoso Maciel Costa Silva; Christianne Bandeira-Melo; Heitor Afonso Paula Neto; André Macedo Vale; Leonardo Holanda Travassos
Journal:  Med Hypotheses       Date:  2022-09-09       Impact factor: 4.411

8.  Molecular analysis of activation-induced cytidine deaminase gene in immunoglobulin-E deficient patients.

Authors:  Sergio Roa; Maria Isidoro-Garcia; Ignacio Davila; Elena Laffond; Felix Lorente; Rogelio Gonzalez-Sarmiento
Journal:  Clin Dev Immunol       Date:  2009-02-25

Review 9.  Association studies for asthma and atopic diseases: a comprehensive review of the literature.

Authors:  Sabine Hoffjan; Dan Nicolae; Carole Ober
Journal:  Respir Res       Date:  2003-12-04

Review 10.  Potential Metabolic Biomarkers in Adult Asthmatics.

Authors:  Soyoon Sim; Youngwoo Choi; Hae-Sim Park
Journal:  Metabolites       Date:  2021-06-30
  10 in total

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