Literature DB >> 11544184

Recruitment of HU by piggyback: a special role of GalR in repressosome assembly.

S Kar1, S Adhya.   

Abstract

In Gal repressosome assembly, a DNA loop is formed by the interaction of two GalR, bound to two distal operators, and the binding of the histone-like protein, HU, to an architecturally critical position on DNA to facilitate the GalR-GalR interaction. We show that GalR piggybacks HU to the critical position on the DNA through a specific GalR-HU interaction. This is the first example of HU making a specific contact with another protein. The GalR-HU contact that results in cooperative binding of the two proteins to DNA may be transient and absent in the final repressosome structure. A sequence-independent DNA-binding protein being recruited to an architectural site on DNA through a specific association with a regulatory protein may be a common mode for assembly of complex nucleoprotein structures.

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Year:  2001        PMID: 11544184      PMCID: PMC312769          DOI: 10.1101/gad.920301

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  35 in total

1.  Use of bacteriophage lambda recombination functions to promote gene replacement in Escherichia coli.

Authors:  K C Murphy
Journal:  J Bacteriol       Date:  1998-04       Impact factor: 3.490

2.  Repressor induced site-specific binding of HU for transcriptional regulation.

Authors:  T Aki; S Adhya
Journal:  EMBO J       Date:  1997-06-16       Impact factor: 11.598

3.  Histone-like protein HU as a specific transcriptional regulator: co-factor role in repression of gal transcription by GAL repressor.

Authors:  T Aki; H E Choy; S Adhya
Journal:  Genes Cells       Date:  1996-02       Impact factor: 1.891

Review 4.  Architectural transcription factors: proteins that remodel DNA.

Authors:  M H Werner; S K Burley
Journal:  Cell       Date:  1997-03-21       Impact factor: 41.582

Review 5.  Theory of the mobility-shift assay of nonspecific protein-DNA complexes governed by conditional probabilities: the HU:DNA complex.

Authors:  J R Cann; O Pfenninger; D E Pettijohn
Journal:  Electrophoresis       Date:  1995-06       Impact factor: 3.535

Review 6.  Histones, HMG, HU, IHF: Même combat.

Authors:  J Oberto; K Drlica; J Rouvière-Yaniv
Journal:  Biochimie       Date:  1994       Impact factor: 4.079

7.  High mobility group protein-1 (HMG-1) is a unique activator of p53.

Authors:  L Jayaraman; N C Moorthy; K G Murthy; J L Manley; M Bustin; C Prives
Journal:  Genes Dev       Date:  1998-02-15       Impact factor: 11.361

8.  Solution structure of the HU protein from Bacillus stearothermophilus.

Authors:  H Vis; M Mariani; C E Vorgias; K S Wilson; R Kaptein; R Boelens
Journal:  J Mol Biol       Date:  1995-12-08       Impact factor: 5.469

9.  HMG1 interacts with HOX proteins and enhances their DNA binding and transcriptional activation.

Authors:  V Zappavigna; L Falciola; M Helmer-Citterich; F Mavilio; M E Bianchi
Journal:  EMBO J       Date:  1996-09-16       Impact factor: 11.598

10.  High mobility group protein 2 functionally interacts with the POU domains of octamer transcription factors.

Authors:  S Zwilling; H König; T Wirth
Journal:  EMBO J       Date:  1995-03-15       Impact factor: 11.598

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  17 in total

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Authors:  Belén Calles; Margarita Salas; Fernando Rojo
Journal:  EMBO J       Date:  2002-11-15       Impact factor: 11.598

2.  Operator-bound GalR dimers close DNA loops by direct interaction: tetramerization and inducer binding.

Authors:  Szabolcs Semsey; Mark Geanacopoulos; Dale E A Lewis; Sankar Adhya
Journal:  EMBO J       Date:  2002-08-15       Impact factor: 11.598

3.  Fluorescence resonance energy transfer over approximately 130 basepairs in hyperstable lac repressor-DNA loops.

Authors:  Laurence M Edelman; Raymond Cheong; Jason D Kahn
Journal:  Biophys J       Date:  2003-02       Impact factor: 4.033

4.  DNA trajectory in the Gal repressosome.

Authors:  Szabolcs Semsey; Michail Y Tolstorukov; Konstantin Virnik; Victor B Zhurkin; Sankar Adhya
Journal:  Genes Dev       Date:  2004-08-01       Impact factor: 11.361

5.  Nucleoid remodeling by an altered HU protein: reorganization of the transcription program.

Authors:  Sudeshna Kar; Rotem Edgar; Sankar Adhya
Journal:  Proc Natl Acad Sci U S A       Date:  2005-10-28       Impact factor: 11.205

6.  Homologies and divergences in the transcription regulatory system of two related Bacillus subtilis phages.

Authors:  Laura Pérez-Lago; Margarita Salas; Ana Camacho
Journal:  J Bacteriol       Date:  2005-09       Impact factor: 3.490

7.  Spiral structure of Escherichia coli HUalphabeta provides foundation for DNA supercoiling.

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Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-05       Impact factor: 11.205

8.  Identification, cloning and characterization of a new DNA-binding protein from the hyperthermophilic methanogen Methanopyrus kandleri.

Authors:  Nikolai A Pavlov; Dmitry I Cherny; Igor V Nazimov; Alexei I Slesarev; Vinod Subramaniam
Journal:  Nucleic Acids Res       Date:  2002-02-01       Impact factor: 16.971

9.  Homolog comparisons further reconcile in vitro and in vivo correlations of protein activities by revealing over-looked physiological factors.

Authors:  Sudheer Tungtur; Kristen M Schwingen; Joshua J Riepe; Chamitha J Weeramange; Liskin Swint-Kruse
Journal:  Protein Sci       Date:  2019-08-09       Impact factor: 6.725

10.  HupB, a nucleoid-associated protein of Mycobacterium tuberculosis, is modified by serine/threonine protein kinases in vivo.

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Journal:  J Bacteriol       Date:  2014-05-09       Impact factor: 3.490

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