Literature DB >> 11539557

Faster rates with less catalyst in template-directed reactions.

A Kanavarioti1, E E Baird.   

Abstract

We have recently shown that the polycytidylic acid-directed polymerization of guanosine 5'-monophosphate 2-methylimidazolide (2-MeImpG) is amenable to kinetic study and that rate determinations as a function of 2-MeImpG concentration can reveal much mechanistic detail (Kanavarioti et al. 1993). Here we report kinetic data which show that, once the reaction has been initiated by the formation of dimers, the elongation of dimers to form longer oligomers is accelerated by decreasing polycytidylate (poly(C)) concentration from 0.05 to 0.002 M. This result is consistent with the previously proposed mechanism. The increase in the observed pseudo-first order rate constant for formation of the trimer, k3', and the corresponding constant for formation of oligomers longer than the trimer, ki' (ki' is independent of oligomer length for i > or = 4), with decreasing template concentration for a given monomer concentration is attributed to an increase in template occupancy as template concentration is reduced.

Entities:  

Keywords:  NASA Discipline Exobiology; Non-NASA Center

Mesh:

Substances:

Year:  1995        PMID: 11539557     DOI: 10.1007/bf00170669

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  7 in total

1.  Base pairing equilibria between polynucleotides and complementary monomers.

Authors:  R J Davies; N Davidson
Journal:  Biopolymers       Date:  1971       Impact factor: 2.505

2.  Oligomerization of (guanosine 5'-phosphor)-2-methylimidazolide on poly(C). An RNA polymerase model.

Authors:  T Inoue; L E Orgel
Journal:  J Mol Biol       Date:  1982-11-25       Impact factor: 5.469

3.  The improbability of prebiotic nucleic acid synthesis.

Authors:  R Shapiro
Journal:  Orig Life       Date:  1984

4.  Nonenzymatic template-directed synthesis on oligodeoxycytidylate sequences in hairpin oligonucleotides.

Authors:  T Wu; L E Orgel
Journal:  J Am Chem Soc       Date:  1992       Impact factor: 15.419

5.  Affinity of guanosine derivatives for polycytidylate revisited.

Authors:  A Kanavarioti; T B Hurley; E E Baird
Journal:  J Mol Evol       Date:  1995       Impact factor: 2.395

6.  Nonenzymatic template-directed synthesis on hairpin oligonucleotides. 2. Templates containing cytidine and guanosine residues.

Authors:  T Wu; L E Orgel
Journal:  J Am Chem Soc       Date:  1992       Impact factor: 15.419

7.  Kinetic dissection of individual steps in the poly(C)-directed oligoguanylate synthesis from guanosine 5'-monophosphate 2-methylimidazolide.

Authors:  A Kanavarioti; C F Bernasconi; D J Alberas; E E Baird
Journal:  J Am Chem Soc       Date:  1993       Impact factor: 15.419

  7 in total
  1 in total

1.  Emergence of template-and-sequence-directed (TSD) syntheses: II. A computer simulation model.

Authors:  S Nir; N Lahav
Journal:  Orig Life Evol Biosph       Date:  1997-12       Impact factor: 1.950

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.