Literature DB >> 11539553

Amino acid racemization in amber-entombed insects: implications for DNA preservation.

J L Bada1, X S Wang, H N Poinar, S Paabo, G O Poinar.   

Abstract

DNA depurination and amino acid racemization take place at similar rates in aqueous solution at neutral pH. This relationship suggests that amino acid racemization may be useful in accessing the extent of DNA chain breakage in ancient biological remains. To test this suggestion, we have investigated the amino acids in insects entombed in fossilized tree resins ranging in age from <100 years to 130 million years. The amino acids present in 40 to 130 million year old amber-entombed insects resemble those in a modern fly and are probably the most ancient, unaltered amino acids found so far on Earth. In comparison to other geochemical environments on the surface of the Earth, the amino acid racemization rate in amber insect inclusions is retarded by a factor of >10(4). These results suggest that in amber insect inclusions DNA depurination rates would also likely be retarded in comparison to aqueous solution measurements, and thus DNA fragments containing many hundreds of base pairs should be preserved. This conclusion is consistent with the reported successful retrieval of DNA sequences from amber-entombed organisms.

Entities:  

Keywords:  NASA Discipline Exobiology; Non-NASA Center

Mesh:

Substances:

Year:  1994        PMID: 11539553     DOI: 10.1016/0016-7037(94)90185-6

Source DB:  PubMed          Journal:  Geochim Cosmochim Acta        ISSN: 0016-7037            Impact factor:   5.010


  12 in total

1.  Protein preservation and DNA retrieval from ancient tissues.

Authors:  H N Poinar; B A Stankiewicz
Journal:  Proc Natl Acad Sci U S A       Date:  1999-07-20       Impact factor: 11.205

2.  Incorporation of DNA and protein precursors into macromolecules by bacteria at -15 degrees C.

Authors:  Brent C Christner
Journal:  Appl Environ Microbiol       Date:  2002-12       Impact factor: 4.792

3.  Cellular fine structures and histochemical reactions in the tissue of a cypress twig preserved in Baltic amber.

Authors:  Barbara Koller; Jürgen M Schmitt; Gilbert Tischendorf
Journal:  Proc Biol Sci       Date:  2005-01-22       Impact factor: 5.349

4.  Preservation of key biomolecules in the fossil record: current knowledge and future challenges.

Authors:  J L Bada; X S Wang; H Hamilton
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1999-01-29       Impact factor: 6.237

Review 5.  Predicting protein decomposition: the case of aspartic-acid racemization kinetics.

Authors:  M J Collins; E R Waite; A C van Duin
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1999-01-29       Impact factor: 6.237

6.  Typing single polymorphic nucleotides in mitochondrial DNA as a way to access Middle Pleistocene DNA.

Authors:  Cristina Valdiosera; Nuria García; Love Dalén; Colin Smith; Ralf-Dietrich Kahlke; Kerstin Lidén; Anders Angerbjörn; Juan Luis Arsuaga; Anders Götherström
Journal:  Biol Lett       Date:  2006-12-22       Impact factor: 3.703

7.  Otzi's last meals: DNA analysis of the intestinal content of the Neolithic glacier mummy from the Alps.

Authors:  Franco Rollo; Massimo Ubaldi; Luca Ermini; Isolina Marota
Journal:  Proc Natl Acad Sci U S A       Date:  2002-09-20       Impact factor: 11.205

8.  Ancient amino acids from fossil feathers in amber.

Authors:  Victoria E McCoy; Sarah E Gabbott; Kirsty Penkman; Matthew J Collins; Samantha Presslee; John Holt; Harrison Grossman; Bo Wang; Monica M Solórzano Kraemer; Xavier Delclòs; Enrique Peñalver
Journal:  Sci Rep       Date:  2019-04-23       Impact factor: 4.379

9.  Fluoridation of a lizard bone embedded in Dominican amber suggests open-system behavior.

Authors:  H Jonas Barthel; Denis Fougerouse; Thorsten Geisler; Jes Rust
Journal:  PLoS One       Date:  2020-02-26       Impact factor: 3.240

10.  The Ladder of Life Detection.

Authors:  Marc Neveu; Lindsay E Hays; Mary A Voytek; Michael H New; Mitchell D Schulte
Journal:  Astrobiology       Date:  2018-06-04       Impact factor: 4.335

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