Literature DB >> 11538307

Phylogenetic placement of the Spirosomaceae.

C R Woese1, S Maloy, L Mandelco, H D Raj.   

Abstract

Comparative analysis of 16S rRNA sequences shows that the family Spirosomaceae belongs within the eubacterial phylum defined by the flavobacteria and bacteriodes. Its constituent genera, Spirosoma, Flectobacillus, and Runella form a monophyletic grouping therein. The phylogenetic assignment is based not only upon evolutionary distance analysis, but also upon sequence signatures and higher order structural synapomorphies in 16S rRNA. Another genus peripherally associated with the Spirosomaceae, Ancylobacter ("Microcyclus"), does not cluster with the flavobacteria and their relatives, but rather belongs to the alpha subdivision of the purple bacteria.

Keywords:  NASA Discipline Exobiology; NASA Discipline Number 52-30; NASA Program Exobiology; Non-NASA Center

Mesh:

Substances:

Year:  1990        PMID: 11538307     DOI: 10.1016/S0723-2020(11)80175-X

Source DB:  PubMed          Journal:  Syst Appl Microbiol        ISSN: 0723-2020            Impact factor:   4.022


  9 in total

1.  Compilation of small ribosomal subunit RNA sequences.

Authors:  P De Rijk; J M Neefs; Y Van de Peer; R De Wachter
Journal:  Nucleic Acids Res       Date:  1992-05-11       Impact factor: 16.971

2.  Architecture of ribosomal RNA: constraints on the sequence of "tetra-loops".

Authors:  C R Woese; S Winker; R R Gutell
Journal:  Proc Natl Acad Sci U S A       Date:  1990-11       Impact factor: 11.205

3.  New nucleotide sequence data on the EMBL File Server.

Authors: 
Journal:  Nucleic Acids Res       Date:  1991-06-11       Impact factor: 16.971

4.  New nucleotide sequence data on the EMBL File Server.

Authors: 
Journal:  Nucleic Acids Res       Date:  1991-06-25       Impact factor: 16.971

Review 5.  The selective value of bacterial shape.

Authors:  Kevin D Young
Journal:  Microbiol Mol Biol Rev       Date:  2006-09       Impact factor: 11.056

6.  Phylogeny of Bacteroides, Prevotella, and Porphyromonas spp. and related bacteria.

Authors:  B J Paster; F E Dewhirst; I Olsen; G J Fraser
Journal:  J Bacteriol       Date:  1994-02       Impact factor: 3.490

7.  Identification and characterization of small RNAs in the hyperthermophilic archaeon Sulfolobus solfataricus.

Authors:  Ning Xu; Yan Li; Ying-Tao Zhao; Li Guo; Yuan-Yuan Fang; Jian-Hua Zhao; Xiu-Jie Wang; Li Huang; Hui-Shan Guo
Journal:  PLoS One       Date:  2012-04-13       Impact factor: 3.240

8.  Genome-wide miRNA seeds prediction in Archaea.

Authors:  Shengqin Wang; Yuming Xu; Zuhong Lu
Journal:  Archaea       Date:  2014-05-14       Impact factor: 3.273

Review 9.  Romance of the three domains: how cladistics transformed the classification of cellular organisms.

Authors:  Chi-Chun Ho; Susanna K P Lau; Patrick C Y Woo
Journal:  Protein Cell       Date:  2013-07-19       Impact factor: 14.870

  9 in total

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