Literature DB >> 11537104

Fractal landscape analysis of DNA walks.

C K Peng1, S V Buldyrev, A L Goldberger, S Havlin, F Sciortino, M Simons, H E Stanley.   

Abstract

By mapping nucleotide sequences onto a "DNA walk", we uncovered remarkably long-range power law correlations [Nature 356 (1992) 168] that imply a new scale invariant property of DNA. We found such long-range correlations in intron-containing genes and in non-transcribed regulatory DNA sequences, but not in cDNA sequences or intron-less genes. In this paper, we present more explicit evidences to support our findings.

Keywords:  NASA Discipline Cardiopulmonary; NASA Discipline Number 14-10; NASA Program Space Physiology and Countermeasures; Non-NASA Center

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Year:  1992        PMID: 11537104     DOI: 10.1016/0378-4371(92)90500-p

Source DB:  PubMed          Journal:  Physica A        ISSN: 0378-4371            Impact factor:   3.263


  8 in total

1.  Scaling behavior in mitochondrial redox fluctuations.

Authors:  V Krishnan Ramanujan; Gabriel Biener; Brian A Herman
Journal:  Biophys J       Date:  2006-03-24       Impact factor: 4.033

2.  Non-equilibrium dynamics as an indispensable characteristic of a healthy biological system.

Authors:  C K Peng; S V Buldyrev; J M Hausdorff; S Havlin; J E Mietus; M Simons; H E Stanley; A L Goldberger
Journal:  Integr Physiol Behav Sci       Date:  1994 Jul-Sep

Review 3.  Lung cancer-a fractal viewpoint.

Authors:  Frances E Lennon; Gianguido C Cianci; Nicole A Cipriani; Thomas A Hensing; Hannah J Zhang; Chin-Tu Chen; Septimiu D Murgu; Everett E Vokes; Michael W Vannier; Ravi Salgia
Journal:  Nat Rev Clin Oncol       Date:  2015-07-14       Impact factor: 66.675

4.  The DNA walk and its demonstration of deterministic chaos-relevance to genomic alterations in lung cancer.

Authors:  Blake Hewelt; Haiqing Li; Mohit Kumar Jolly; Prakash Kulkarni; Isa Mambetsariev; Ravi Salgia
Journal:  Bioinformatics       Date:  2019-08-15       Impact factor: 6.937

5.  Segmentation of time series in up- and down-trends using the epsilon-tau procedure with application to USD/JPY foreign exchange market data.

Authors:  Arthur Matsuo Yamashita Rios de Sousa; Hideki Takayasu; Misako Takayasu
Journal:  PLoS One       Date:  2020-09-18       Impact factor: 3.240

6.  Phylogenetic distribution of large-scale genome patchiness.

Authors:  José L Oliver; Pedro Bernaola-Galván; Michael Hackenberg; Pedro Carpena
Journal:  BMC Evol Biol       Date:  2008-04-11       Impact factor: 3.260

7.  Diagnosis of skin cancer by correlation and complexity analyses of damaged DNA.

Authors:  Hamidreza Namazi; Vladimir V Kulish; Fatemeh Delaviz; Ali Delaviz
Journal:  Oncotarget       Date:  2015-12-15

8.  Diagnosis of Lung Cancer by Fractal Analysis of Damaged DNA.

Authors:  Hamidreza Namazi; Mona Kiminezhadmalaie
Journal:  Comput Math Methods Med       Date:  2015-10-11       Impact factor: 2.238

  8 in total

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