Literature DB >> 11536830

Emergence of template-and-sequence-directed (TSD) syntheses: I. A bio-geochemical model.

N Lahav1, S Nir.   

Abstract

A biogeochemical model for the evolution of template-and-sequence-directed (TSD) syntheses of biological templates (proto-RNAs) and catalysts (peptides) is described. A fluctuating environment characterized by hydrating (cool) and dehydrating (warm) phases with cycles of consecutive organic reactions, as well as a constant supply of the polymeric building blocks is assumed. The scenario starts with the catalyzed formation of a primordial population of small random peptides, based on the relatively-ineffective mineral catalysts. The resulting peptides initiate a catalytic takeover process, during which the catalytic functions are gradually taken over by peptides. The evolution of TSD peptides is based on a combination of Lahav's (1991) co-evolution and Moller and Janssen's (1990) specific recognition sites hypotheses. During the emergence of TSD systems the fraction of TSD peptides and proto-RNA constituents rises from almost insignificance to dominance in a TSD Reactions Takeover. The TSD system is characterized by autocatalysis, positive feedback loops and a primordial genetic code. The model is the basis for a computer program (Part II of present series).

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Year:  1997        PMID: 11536830     DOI: 10.1023/a:1006588421147

Source DB:  PubMed          Journal:  Orig Life Evol Biosph        ISSN: 0169-6149            Impact factor:   1.950


  28 in total

Review 1.  Transfer RNAs for primordial amino acids contain remnants of a primitive code at position 3 to 5.

Authors:  W Möller; G M Janssen
Journal:  Biochimie       Date:  1990-05       Impact factor: 4.079

Review 2.  Structural and functional relationships between aminoacyl-tRNA synthetases.

Authors:  D Moras
Journal:  Trends Biochem Sci       Date:  1992-04       Impact factor: 13.807

3.  Statistical evidence for remnants of the primordial code in the acceptor stem of prokaryotic transfer RNA.

Authors:  W Möller; G M Janssen
Journal:  J Mol Evol       Date:  1992-06       Impact factor: 2.395

4.  Catalysis and prebiotic RNA synthesis.

Authors:  J P Ferris
Journal:  Orig Life Evol Biosph       Date:  1993-12       Impact factor: 1.950

5.  Molecular evolution of transfer RNA from two precursor hairpins: implications for the origin of protein synthesis.

Authors:  T P Dick; W A Schamel
Journal:  J Mol Evol       Date:  1995-07       Impact factor: 2.395

6.  Simulation studies of self-replicating oligoribotides, with a proposal for the transition to a peptide-assisted stage.

Authors:  R Ferreira; K R Coutinho
Journal:  J Theor Biol       Date:  1993-10-07       Impact factor: 2.691

7.  Synthesis of long prebiotic oligomers on mineral surfaces.

Authors:  J P Ferris; A R Hill; R Liu; L E Orgel
Journal:  Nature       Date:  1996-05-02       Impact factor: 49.962

Review 8.  Possible role of aminoacyl-RNA complexes in noncoded peptide synthesis and origin of coded synthesis.

Authors:  P Schimmel; B Henderson
Journal:  Proc Natl Acad Sci U S A       Date:  1994-11-22       Impact factor: 11.205

9.  Peptide chain elongation: a possible role of montmorillonite in prebiotic synthesis of protein precursors.

Authors:  J Bujdák; K Faybíková; A Eder; Y Yongyai; B M Rode
Journal:  Orig Life Evol Biosph       Date:  1995-10       Impact factor: 1.950

10.  The biogeochemical cycle of the adsorbed template. II: Selective adsorption of mononucleotides on adsorbed polynucleotide templates.

Authors:  D Lazard; N Lahav; J B Orenberg
Journal:  Orig Life Evol Biosph       Date:  1988       Impact factor: 1.950

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  6 in total

1.  Inhibition of rare earth catalytic activity by proteins.

Authors:  M Akaboshi; Y Tanaka; Y Nakano; K Kawai; N Fujii
Journal:  Orig Life Evol Biosph       Date:  2000-02       Impact factor: 1.950

2.  A system of two polymerases--a model for the origin of life.

Authors:  V Kunin
Journal:  Orig Life Evol Biosph       Date:  2000-10       Impact factor: 1.950

Review 3.  On the emergence of biological complexity: life as a kinetic state of matter.

Authors:  Addy Pross
Journal:  Orig Life Evol Biosph       Date:  2005-04       Impact factor: 1.950

4.  The lipid world.

Authors:  D Segré; D Ben-Eli; D W Deamer; D Lancet
Journal:  Orig Life Evol Biosph       Date:  2001 Feb-Apr       Impact factor: 1.950

5.  Emergence of template-and-sequence-directed (TSD) syntheses: II. A computer simulation model.

Authors:  S Nir; N Lahav
Journal:  Orig Life Evol Biosph       Date:  1997-12       Impact factor: 1.950

6.  The structure and synthetic capabilities of a catalytic peptide formed by substrate-directed mechanism--implications to prebiotic catalysis.

Authors:  Gideon Fleminger; Tal Yaron; Miriam Eisenstein; Akiva Bar-Nun
Journal:  Orig Life Evol Biosph       Date:  2005-08       Impact factor: 1.950

  6 in total

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